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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99953.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  133/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:371 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   62->136 PF07949 * YbbR 1.5e-11 26.1 69/82  
:HMM:PFM   144->229 PF07949 * YbbR 1.3e-13 38.3 81/82  
:HMM:PFM   248->317 PF07949 * YbbR 8.2e-08 24.6 69/82  
:HMM:PFM   311->364 PF11276 * DUF3078 0.00086 25.9 54/92  
:BLT:SWISS 3->330 YBBR_BACSU 2e-32 28.5 %
:TM
:REPEAT 2|114->208|209->300
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99953.1 GT:GENE ABD99953.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1178925..1180040) GB:FROM 1178925 GB:TO 1180040 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG0718 [S] Uncharacterized protein conserved in bacteria GB:PROTEIN_ID ABD99953.1 GB:DB_XREF GI:90821314 LENGTH 371 SQ:AASEQ MKLSKYFNTKFFYRIVALIFALFLFFYVNADQLTSGQSTGHTLTTSTNEKSIVIEMPLKVKGAKDTEFVAGLPDKVKVRIIGPSAIVTAINNTRNFEVYADLTGKGYGKHTITLSQSGLSKEVSAKIDPQTVKVKISKKATKTFPVQARYNSSNVASGYATGSVTMNNQTVRVTGAKNDVKNVEIVVANVNIPSGTKNDVVRSVLLQALDKKGKSLDVVFDPETVRVTIPVFEASSSKKVSLNLVQSDGDKNRSYSISTDTKTVVLHGTKQALSKVSTLTVPVSVEGVTSSVTRTIQLQSTISGIASISPATISVTITASGDNNESSADVSQTNKIDNSLNNDKTEDDSSKTSSNISVSSSNSEKSSESNN GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 3->330|YBBR_BACSU|2e-32|28.5|319/483| TM:NTM 1 TM:REGION 10->32| NREPEAT 1 REPEAT 2|114->208|209->300| SEG 17->26|alifalflff| SEG 343->370|dkteddssktssnisvsssnsekssesn| HM:PFM:NREP 4 HM:PFM:REP 62->136|PF07949|1.5e-11|26.1|69/82|YbbR| HM:PFM:REP 144->229|PF07949|1.3e-13|38.3|81/82|YbbR| HM:PFM:REP 248->317|PF07949|8.2e-08|24.6|69/82|YbbR| HM:PFM:REP 311->364|PF11276|0.00086|25.9|54/92|DUF3078| OP:NHOMO 133 OP:NHOMOORG 133 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111111111111111111111111111111111-11111111111111111111111-1111111111111111111-1111111111111111111111111111111111111111111111-------------------------------1-----1----1-11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,35-47,341-372| PSIPRED ccHHHHHHccccEEEHHHHHHHHHEEEEEEccccccccccccccccccccEEEEEEEEEEEEccccEEEEccccEEEEEEEEccHHHHccccccEEEEEEEcccccccEEEEEEEEEcccccEEEEEEccEEEEEEEEEEEEEEEEEEEEccccccccEEEEEEEccccEEEEEEcHHHHHcccEEEEEEcccccccccEEEEEEEEEEcccccEEEEEEcccEEEEEEEEEccccEEEEEEEEEccccccEEEEEEEEcccEEEEEEcHHHHHHccEEEEEEEcccccccEEEEEEEEccccccEEEEccEEEEEEEEEcccEEEEEEEEEEEccccccccccccccccccccEEEEEcccccccccccc //