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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00001.1
DDBJ      :             Phage immunity repressor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:126 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->71 1y9qA PDBj 3e-04 38.9 %
:RPS:PDB   17->75 3dnvB PDBj 6e-11 22.0 %
:RPS:SCOP  17->78 1y9qA1  a.35.1.8 * 8e-11 32.3 %
:HMM:SCOP  7->85 1y9qA1 a.35.1.8 * 1.7e-13 29.1 %
:RPS:PFM   19->73 PF01381 * HTH_3 1e-04 36.4 %
:HMM:PFM   19->73 PF01381 * HTH_3 1.9e-17 36.4 55/55  
:BLT:SWISS 18->107 YOBD_BACSU 3e-10 40.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00001.1 GT:GENE ABE00001.1 GT:PRODUCT Phage immunity repressor GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1230943..1231323 GB:FROM 1230943 GB:TO 1231323 GB:DIRECTION + GB:PRODUCT Phage immunity repressor GB:PROTEIN_ID ABE00001.1 GB:DB_XREF GI:90821362 LENGTH 126 SQ:AASEQ MTTFKKLKYDSNLKPNNRLRQLRLSKDLTLKKVADDIGISENLIGKYEREEREPKLKTWIKLADYFNVSVSYLQGLTGFSKGKAPSDDLDINYLHQRINRMLEIDNIQELQNELENVIKITHLMQK GT:EXON 1|1-126:0| BL:SWS:NREP 1 BL:SWS:REP 18->107|YOBD_BACSU|3e-10|40.7|81/112| BL:PDB:NREP 1 BL:PDB:REP 17->71|1y9qA|3e-04|38.9|54/173| RP:PDB:NREP 1 RP:PDB:REP 17->75|3dnvB|6e-11|22.0|59/71| RP:PFM:NREP 1 RP:PFM:REP 19->73|PF01381|1e-04|36.4|55/55|HTH_3| HM:PFM:NREP 1 HM:PFM:REP 19->73|PF01381|1.9e-17|36.4|55/55|HTH_3| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 17->78|1y9qA1|8e-11|32.3|62/79|a.35.1.8| HM:SCP:REP 7->85|1y9qA1|1.7e-13|29.1|79/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 17 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-----1-11----1-1---------------------------------1----------------12--------------------------------------------------------------1---1-------------------------1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 111 STR:RPRED 88.1 SQ:SECSTR ########cHHHccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHcGGGccHHHHHHHHHHTTccccccccHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHccccHHHHHHHHHH####### DISOP:02AL 1-2,6-7,126-127| PSIPRED cccHHHHccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc //