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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00022.1
DDBJ      :             Redox-sensitive transcriptional regulator Rex
Swiss-Prot:REX_LACS1    RecName: Full=Redox-sensing transcriptional repressor rex;

Homologs  Archaea  0/68 : Bacteria  254/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.2.1
:213 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->213 2vt3B PDBj 2e-64 56.0 %
:RPS:PDB   4->207 2dt5B PDBj 4e-20 24.8 %
:RPS:SCOP  81->205 1xcbA2  c.2.1.12 * 2e-24 31.7 %
:HMM:SCOP  7->80 1xcbA1 a.4.5.38 * 2e-24 58.1 %
:HMM:SCOP  81->208 1xcbA2 c.2.1.12 * 4.1e-32 33.3 %
:RPS:PFM   4->53 PF06971 * Put_DNA-bind_N 3e-07 48.0 %
:RPS:PFM   84->177 PF02629 * CoA_binding 2e-05 33.7 %
:HMM:PFM   83->178 PF02629 * CoA_binding 6.4e-29 38.0 92/96  
:HMM:PFM   5->53 PF06971 * Put_DNA-bind_N 5.2e-27 63.3 49/50  
:BLT:SWISS 1->213 REX_LACS1 e-110 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00022.1 GT:GENE ABE00022.1 GT:PRODUCT Redox-sensitive transcriptional regulator Rex GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1249248..1249889) GB:FROM 1249248 GB:TO 1249889 GB:DIRECTION - GB:PRODUCT Redox-sensitive transcriptional regulator Rex GB:NOTE COG2344 [R] AT-rich DNA-binding protein GB:PROTEIN_ID ABE00022.1 GB:DB_XREF GI:90821383 LENGTH 213 SQ:AASEQ MAEVKIPQATAKRLPIYYRYLRLLSNSGKNRVSSTELAEAVKVDSATIRRDFSYFGALGKRGYGYDVQSLLDFFTKQLNQDTLTNVALVGVGNLGHALLNFNFHQSNHVRISAAFDVNEDITGTIQSGIPVYPMSDMKEQLKLQQIEIVILTVPAPVAQKVTDELVEVGVRGILNFTPLRITVPENIRVQNVDLTNEMETLIYFLNHFGSTEE GT:EXON 1|1-213:0| SW:ID REX_LACS1 SW:DE RecName: Full=Redox-sensing transcriptional repressor rex; SW:GN Name=rex; OrderedLocusNames=LSL_1214; SW:KW Complete proteome; Cytoplasm; DNA-binding; NAD; Repressor;Transcription; Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->213|REX_LACS1|e-110|100.0|213/213| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| SEG 13->24|rlpiyyrylrll| BL:PDB:NREP 1 BL:PDB:REP 5->213|2vt3B|2e-64|56.0|207/208| RP:PDB:NREP 1 RP:PDB:REP 4->207|2dt5B|4e-20|24.8|202/211| RP:PFM:NREP 2 RP:PFM:REP 4->53|PF06971|3e-07|48.0|50/50|Put_DNA-bind_N| RP:PFM:REP 84->177|PF02629|2e-05|33.7|89/95|CoA_binding| HM:PFM:NREP 2 HM:PFM:REP 83->178|PF02629|6.4e-29|38.0|92/96|CoA_binding| HM:PFM:REP 5->53|PF06971|5.2e-27|63.3|49/50|Put_DNA-bind_N| GO:PFM:NREP 4 GO:PFM GO:0005737|"GO:cytoplasm"|PF06971|IPR009718| GO:PFM GO:0016481|"GO:negative regulation of transcription"|PF06971|IPR009718| GO:PFM GO:0016564|"GO:transcription repressor activity"|PF06971|IPR009718| GO:PFM GO:0051775|"GO:response to redox state"|PF06971|IPR009718| RP:SCP:NREP 1 RP:SCP:REP 81->205|1xcbA2|2e-24|31.7|123/126|c.2.1.12| HM:SCP:REP 7->80|1xcbA1|2e-24|58.1|74/74|a.4.5.38|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 81->208|1xcbA2|4.1e-32|33.3|126/0|c.2.1.12|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 275 OP:NHOMOORG 254 OP:PATTERN -------------------------------------------------------------------- --1-1-------------------------------111111111-------111--1--111-1111111-----------1-----1111-111----------------------------------------11111---11-------------------------------------11111111-1111111111111111111111111111111111111111111111111111111-111112111221111111112221111111111111111111111111111111111111111111111111111121111111111111111111111121111131111111311211111-11-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1111111111-------1--------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------------------------2112222222--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 98.6 SQ:SECSTR ###ccccccHHHHHHHHHHHHHHHHHTTccEEcHHHHHHHTTccHHHHHHHHHHTTccccTTTcEEHHHHHHHHHHHHTTTccEEEEEEccccHHHHHHHTcccccccEEEEEEEEccTTTTTcEETTEEcEEGGGGGGTcTTTccEEEEcccHHHHHHHHHHHHHHHTccEEEEcccccccccTTcEEEEccTTTHHHHHHHHHHcGccccc DISOP:02AL 1-4,209-214| PSIPRED cccccccHHHHHccHHHHHHHHHHHHccccEEcHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHccHHHcccEEEEEEEccHHHccEEEccEEEccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccEEEEEccEEEEcccccEEEEEEHHHHHHHHHHHHHHHHHHcc //