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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00023.1
DDBJ      :             ABC transporter, ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  886/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
c.37.1e.26.1e.38.1
:649 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   3->49 2oukB PDBj 6e-04 25.5 %
:BLT:PDB   21->74,164->234,315->529 2ix3A PDBj 7e-19 28.8 %
:RPS:PDB   3->48 2d62A PDBj 1e-08 26.1 %
:RPS:PDB   23->515 3cmvA PDBj 2e-41 9.2 %
:RPS:SCOP  3->61 1q3hA  c.37.1.12 * 5e-13 27.1 %
:RPS:SCOP  34->520 1mjgM  e.26.1.3 * 2e-25 7.2 %
:RPS:SCOP  35->49 1yj5A2  c.37.1.1 * 6e-05 60.0 %
:RPS:SCOP  584->649 1gqeA  e.38.1.1 * 1e-05 29.3 %
:HMM:SCOP  4->250 1e69A_ c.37.1.12 * 2.6e-46 29.5 %
:HMM:SCOP  295->569 1r0wA_ c.37.1.12 * 1.3e-39 22.3 %
:RPS:PFM   32->116 PF00350 * Dynamin_N 2e-04 29.4 %
:RPS:PFM   381->476 PF00005 * ABC_tran 7e-05 33.7 %
:HMM:PFM   43->195 PF00005 * ABC_tran 2.2e-21 47.9 96/118  
:HMM:PFM   370->476 PF00005 * ABC_tran 5.8e-13 30.5 105/118  
:HMM:PFM   23->60 PF03193 * DUF258 2.2e-05 37.8 37/161  
:HMM:PFM   344->392 PF03193 * DUF258 7.6e-06 24.3 37/161  
:BLT:SWISS 1->532 YDIF_BACSU e-155 53.2 %
:PROS 167->181|PS00211|ABC_TRANSPORTER_1
:COIL
:REPEAT 2|2->251|329->532
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00023.1 GT:GENE ABE00023.1 GT:PRODUCT ABC transporter, ATP-binding protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1250063..1252012 GB:FROM 1250063 GB:TO 1252012 GB:DIRECTION + GB:PRODUCT ABC transporter, ATP-binding protein GB:NOTE COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains GB:PROTEIN_ID ABE00023.1 GB:DB_XREF GI:90821384 LENGTH 649 SQ:AASEQ MLLLQAQQVARHFGADILFENVNLDIKDNSKIALVGRNGAGKSTLIKMLIGESLPDEGKIVTKRDLTIGYLAQHTGLESTKNVLDEMLSVFEPLQKMEAKIHQLEEKIASPSIPHESKEYQQLLNQYDQLQHDFQENNGYGYENEVKAVLHGFQFFEDDYGKMVSDLSGGQKTRLALAKLLLEKRDLLILDEPTNHLDIETLTWLENYIQGYTGALLIVSHDRYFLDKVVNEVYELSHQHSSHYVGNYSHYIEEKASRLRTQWKEYEKQQVKIQKLEDFVNKNLVRASTTKRAQSKRKQLEKMDRLERPEGEEKGPHFKFHANKESGNVVLKVTDAAIGYDSKVISNPITFELRKHHAMAIVGPNGIGKSTLLKSILGNIPFIHGSATFGTNVQTGYYDQEQQNLHDKKTVLNEIWDDHPNMLEKDVRSLLGSFLFVGDDVKKVVHNLSGGEKARLTLTKLALQEDNFLMLDEPTNHLDIDSKEVLEGALIDFEGTILFVSHDRYFINQVADTVLEITPEGSNLYLGNYDYYLEKKAELEAIEAAKEAEQSQDDQQVSKTSQKQLNYKKSKELQKQQRKLQRLVDDAESEMERLEELKANIEQEMTLPDNFNDPQKMDALHTKLSKATNDLNEVESKWTELSLELEELQ GT:EXON 1|1-649:0| BL:SWS:NREP 1 BL:SWS:REP 1->532|YDIF_BACSU|e-155|53.2|528/642| PROS 167->181|PS00211|ABC_TRANSPORTER_1|PDOC00185| COIL:NAA 73 COIL:NSEG 2 COIL:REGION 567->607| COIL:REGION 618->649| NREPEAT 1 REPEAT 2|2->251|329->532| SEG 120->131|yqqllnqydqlq| SEG 174->192|rlalaklllekrdllilde| SEG 533->549|lekkaeleaieaakeae| SEG 568->583|kkskelqkqqrklqrl| BL:PDB:NREP 2 BL:PDB:REP 3->49|2oukB|6e-04|25.5|47/241| BL:PDB:REP 21->74,164->234,315->529|2ix3A|7e-19|28.8|333/972| RP:PDB:NREP 2 RP:PDB:REP 3->48|2d62A|1e-08|26.1|46/361| RP:PDB:REP 23->515|3cmvA|2e-41|9.2|487/1190| RP:PFM:NREP 2 RP:PFM:REP 32->116|PF00350|2e-04|29.4|85/165|Dynamin_N| RP:PFM:REP 381->476|PF00005|7e-05|33.7|83/123|ABC_tran| HM:PFM:NREP 4 HM:PFM:REP 43->195|PF00005|2.2e-21|47.9|96/118|ABC_tran| HM:PFM:REP 370->476|PF00005|5.8e-13|30.5|105/118|ABC_tran| HM:PFM:REP 23->60|PF03193|2.2e-05|37.8|37/161|DUF258| HM:PFM:REP 344->392|PF03193|7.6e-06|24.3|37/161|DUF258| GO:PFM:NREP 4 GO:PFM GO:0003924|"GO:GTPase activity"|PF00350|IPR001401| GO:PFM GO:0005525|"GO:GTP binding"|PF00350|IPR001401| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 4 RP:SCP:REP 3->61|1q3hA|5e-13|27.1|59/265|c.37.1.12| RP:SCP:REP 34->520|1mjgM|2e-25|7.2|471/728|e.26.1.3| RP:SCP:REP 35->49|1yj5A2|6e-05|60.0|15/172|c.37.1.1| RP:SCP:REP 584->649|1gqeA|1e-05|29.3|58/362|e.38.1.1| HM:SCP:REP 4->250|1e69A_|2.6e-46|29.5|241/308|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 295->569|1r0wA_|1.3e-39|22.3|273/0|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 5979 OP:NHOMOORG 1131 OP:PATTERN --111-21344422342-1----432214121131--1-------5261133411533141112---1 345-786766745355433-35223933333355557776165966465443688555227643655789335556656453113-116767-6442-1457574568273222222223333342222222222223323111613311224132222222232-23333322232222222224--212339EEGEFDEFAIFFEHF97AABBFJC313CDB7998888AB6888888688888888889A776986A578C87769A655584666988A658988B99888989996666666866666877776777659B7BCDCGFJF8F69B668998HA53B3562-BD6511341-566436653335553444454A77436967757777766567E-465545455732C998789AA998853446535334566555555553444345511-11222--2342552353324422-2--234335753455555545555446755555564954772366434555536464444434354444344453354684745434355333265666576655557642734633333231221222215223544797555556574566565556654555598--4335411-22286875856778677766-6666777677678766777AAA5557967676676666666759666777651635556555555--351211156565564A434564356344446555554344745555655565566645554244444527656C55555789874444344443333332656655662111111141521223-222321-997223232---2563535324-62 1211446-73415566555456556544444445656544555433445455343454444444544444444545525544444455-5555344434554566924Q55453547343333233353PU5-6472213433352334142163422648846343633D35543A9G*FDD5794BD575CDA777E ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- DISOP:02AL 262-278,280-316,541-581,648-650| PSIPRED ccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHcccccccccEEEEccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccEEEEEccEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEcccEEEEEEcccHHHccccccHHHHHHHHcccccHHHHHHHHHHHcccHHHHHccHHHccHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //