[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00080.1
DDBJ      :             Ornithine cyclodeaminase
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  250/915 : Eukaryota  102/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:328 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->326 1vllA PDBj 1e-52 37.3 %
:RPS:PDB   132->244 3ec7A PDBj 2e-04 16.5 %
:RPS:SCOP  40->327 1u7hA  c.2.1.13 * 1e-69 27.8 %
:HMM:SCOP  1->327 1x7dA_ c.2.1.13 * 6.6e-102 42.3 %
:RPS:PFM   15->317 PF02423 * OCD_Mu_crystall 2e-60 41.0 %
:HMM:PFM   3->318 PF02423 * OCD_Mu_crystall 7e-84 40.8 306/314  
:BLT:SWISS 2->326 OCD2_RHIME 2e-44 34.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00080.1 GT:GENE ABE00080.1 GT:PRODUCT Ornithine cyclodeaminase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1310074..1311060) GB:FROM 1310074 GB:TO 1311060 GB:DIRECTION - GB:PRODUCT Ornithine cyclodeaminase GB:NOTE COG2423 [E] Predicted ornithine cyclodeaminase, mu-crystallin homolog GB:PROTEIN_ID ABE00080.1 GB:DB_XREF GI:90821441 LENGTH 328 SQ:AASEQ MLILKKDDIKKCFTMRDAIEADKEALEIYSEGKAKVPLRTNIDIDEKNGQNLYMPAYVGGNQAAAGLKIVSVYPDNISKGLPSVPATVITLDADTGELGAVIEGTYLTQLRTGAVQGAATELLARKDAKVGALIGTGGQAATQLEAMIEVRDLEEIRIFDIDFSRAKKFAELMADKFNKNIYPCQTAKECVENADIITTVTTSKRATFNDEWVKPGAHINGIGAYTPEMCEIPCETIKRAKTIVFDTLDGVWQEAGDFIQPLNKGEISKDMITGELGQLVAGKIKGRTSDDEITIFKTVGTAVLDVYIADKIVKKAQANGYGHEFELN GT:EXON 1|1-328:0| BL:SWS:NREP 1 BL:SWS:REP 2->326|OCD2_RHIME|2e-44|34.3|321/330| BL:PDB:NREP 1 BL:PDB:REP 2->326|1vllA|1e-52|37.3|314/321| RP:PDB:NREP 1 RP:PDB:REP 132->244|3ec7A|2e-04|16.5|103/328| RP:PFM:NREP 1 RP:PFM:REP 15->317|PF02423|2e-60|41.0|295/304|OCD_Mu_crystall| HM:PFM:NREP 1 HM:PFM:REP 3->318|PF02423|7e-84|40.8|306/314|OCD_Mu_crystall| RP:SCP:NREP 1 RP:SCP:REP 40->327|1u7hA|1e-69|27.8|277/341|c.2.1.13| HM:SCP:REP 1->327|1x7dA_|6.6e-102|42.3|312/0|c.2.1.13|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 627 OP:NHOMOORG 393 OP:PATTERN ------2222222222121111-1322221221-1--------1--11111111------11111--- --2-1--2-----1------------------------1-------11------11----231-1----1-----------12----------1------------------------------------------1111111--1-------------------------------------2----------1111111111111111-----111--2----------32211111111111111111112---11-1----------1------1-------------------------------------------------1111131-1--1---------------------------------1------------------------11111111113-1121151245--6343437643241111-234121133511111111-------1--------------------------------7-1332124-23332----1142-----14333444----221211216322--1----1---------1-1-1------1---------------1-----2------------------------------------3--111----1-2----1-21-11-------------1-1---1---------------------------------11-1-----------------1---------111111111111----121111111---15----------------------131--111121-4-3322-1-11-1--111------------1--1--------------------------------1---------------------------------------- ----111----1-----------1-1-----------------------11-11--1-----11--1--------------1111111-111--111111---112-1112-213211111-111-111342-11111-111111111111111111123311212-112---11---2S-----111211-22----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 325 STR:RPRED 99.1 SQ:SECSTR #EEEcHHHHHTTccHHHHHHHHHHHHHHHHTTcccccccEEEEETTGTEEEEEEEEEETTETEEEEEEEEEEcTTHHHHTcccccEEEEEEcTTTccEEEEEEcHHHHHHHHHHHHHHHHHHHccTTcEEEEEEcccHHHHHHHHHHHTcTTEEEEEEEcccTTHHHHHHHHHHHHHTcccEEEccHHHHHHcTTccEEEEcccGGGHHHGGccTTHHHHHHHTTcEEEEEcccccHHHHHHHHEcccccTTHHHHHHHHHHHHTcccGGGEEEEEEHHHTTccccccccccEEEEEccccHHHHHHHHHHHHHHHHHTTccEEEc## PSIPRED cEEEcHHHHHHHccHHHHHHHHHHHHHHHHcccEEcccEEEEEccccccEEEEEEEEcccccEEEEEEEEEEccccccccccEEEEEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEccHHHHHHcccEEEEEccccccEEcHHHHccccEEEEEcccccccEEccHHHHHcccEEEEccHHHHHHHHHHHHHHHHccccccccEEccHHHHHccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEcc //