[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00085.1
DDBJ      :             Amino acid permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  157/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:535 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->348 3hqkB PDBj 8e-05 24.0 %
:RPS:PFM   71->396 PF00324 * AA_permease 9e-14 31.5 %
:HMM:PFM   39->463 PF00324 * AA_permease 1.7e-26 19.8 414/479  
:BLT:SWISS 10->418 YCAM_ECOLI 1e-95 39.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00085.1 GT:GENE ABE00085.1 GT:PRODUCT Amino acid permease GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1315689..1317296 GB:FROM 1315689 GB:TO 1317296 GB:DIRECTION + GB:PRODUCT Amino acid permease GB:NOTE COG0531 [E] Amino acid transporters GB:PROTEIN_ID ABE00085.1 GB:DB_XREF GI:90821446 LENGTH 535 SQ:AASEQ MDDLSSKNYISWPILTLMAFVTVIGFDDIMYNFQNQGMTVITSWVLMLFLYVIPYSLIVGQLGGIFNKEGGGLSSWIRGTNGEFLGYFTAWTYWAASVPYVVDSANSVVVGFGWAFTGSNKFQDTMSNAEFTFWTFLIFIVFIFIQRHLKNSMELLSTIGGGMMFIMTILFVVLAFFGLAKNGGHMATQPMTWKTIIPKFDLKYWSTVGMLIYAVNGCELIAPYVTKMKQPKRDFPKAMIALSIMTAFLTIFGSFALGIYFNAYHLPNDLKMNGSYYAFQALGQQLGVGKLFMYIYAWTSVLYMCALLAVLLDAMTRMLISDTGDKFMPKFLRKTNSDGLPINGYILTSSLSAFIMLLGVFLPEMNDVFNWLLNLNGIISPGVTCWIFYAFMRVRKNSAKYPSEYVYIKNDKLAYIVGFLLLAVTAIATILGITPQDVKQFSHTWWYELIINIVAIVVLIGLGAILPSIRRREEKYGIAFNKGQWIAILGIVIVSIIFNLWLGGTHLALRGLYIAIESIIALIVITMIGHKNPNI GT:EXON 1|1-535:0| BL:SWS:NREP 1 BL:SWS:REP 10->418|YCAM_ECOLI|1e-95|39.4|409/476| TM:NTM 14 TM:REGION 9->31| TM:REGION 39->61| TM:REGION 96->118| TM:REGION 126->148| TM:REGION 159->181| TM:REGION 198->220| TM:REGION 240->262| TM:REGION 291->313| TM:REGION 341->363| TM:REGION 371->393| TM:REGION 413->435| TM:REGION 446->468| TM:REGION 484->506| TM:REGION 509->531| SEG 420->434|lllavtaiatilgit| SEG 449->466|liinivaivvliglgail| SEG 486->497|iailgivivsii| SEG 514->525|iaiesiialivi| BL:PDB:NREP 1 BL:PDB:REP 15->348|3hqkB|8e-05|24.0|304/420| RP:PFM:NREP 1 RP:PFM:REP 71->396|PF00324|9e-14|31.5|295/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 39->463|PF00324|1.7e-26|19.8|414/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 309 OP:NHOMOORG 159 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------1--------------------------------111-----1-------11---1-----------------111111---1111--------------------------------------------------------------------------------------1---------------112-----11-1--1--111-------45414332517221143344-1-212-------2--------------------------1-------------13333333233-1--2555----1-----11---------11-------1---------------------11-1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------1------------------------------------------1------3332322233-3333322333323233332111-----2222222222222222-1-1111------------------------1111-------------------------------------------------222112212----1--------11-------------------------------------------1--------1-------------------- -----------------------------------------------------------1-1----------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 304 STR:RPRED 56.8 SQ:SECSTR ##############HHHHHHHHHTTcTTTHHHTTTTTHHHHHHH#HHHHHHHHHHHHHHHHHHHH#cccccccHHHHHHHHcHHHHHHHHHHHHHHH###HHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHTTcTTcHHHHHHHTTHHHH###HHTTTTHHHHTccccccccccccc####cHHHHHHHHHHHHGGGGH########HHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHTTTTTTcc#####HHHHHHcccGGccccccccTHHHHHHHHHHHHHHHHHHHHH####HHHHHHHHHTT#cccGGGccccccccHHHHHHHHH########################################################################################################################################################################################### DISOP:02AL 1-11,532-536| PSIPRED ccccccccccHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccHHcccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //