[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00094.1
DDBJ      :             Oxidoreductase
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  373/915 : Eukaryota  90/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:336 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->327 2ho3D PDBj 7e-62 43.4 %
:RPS:PDB   2->312 3ec7A PDBj 9e-32 15.9 %
:RPS:SCOP  2->172 1zh8A1  c.2.1.3 * 3e-25 25.5 %
:RPS:SCOP  172->283 1xeaA2  d.81.1.5 * 3e-08 9.3 %
:HMM:SCOP  2->140 1ofgA1 c.2.1.3 * 3e-32 31.9 %
:HMM:SCOP  128->294 1ydwA2 d.81.1.5 * 8e-17 25.3 %
:RPS:PFM   3->113 PF01408 * GFO_IDH_MocA 7e-12 33.9 %
:HMM:PFM   2->116 PF01408 * GFO_IDH_MocA 9.3e-26 29.2 113/120  
:BLT:SWISS 1->332 YGJR_ECOLI 7e-55 36.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00094.1 GT:GENE ABE00094.1 GT:PRODUCT Oxidoreductase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1328038..1329048) GB:FROM 1328038 GB:TO 1329048 GB:DIRECTION - GB:PRODUCT Oxidoreductase GB:NOTE COG0673 [R] Predicted dehydrogenases and related proteins GB:PROTEIN_ID ABE00094.1 GB:DB_XREF GI:90821455 LENGTH 336 SQ:AASEQ MLRLGIIGTGWIADQFVEAAHATKRWQLSAVYSRRMKRAKEFGSKYSEDIVYFDRLSDFFQSDSFDVVYIASPNSLHFEQAKAAIMAGKHAIVEKPITSNPQEMSQLIKVLRRHPQQFLFEAARHYHEENFKAVQQAVQGMEEIQGATLTYMKYSSRYDAFLEGKNPNVFSPDFAGGALQDLGVYMVYDALAWFGVPDSVNYYATKLNNGIDGKGIAIFNYPQFEVTLQFGKTANSYLPGEIYGKKETIVMDNAADLNEVYIVNGEGEKTIISELADNNPMLAEVIDFADVLENPDSLEARDIADEWLAMSVEVNKVMYKLRYYAKIEFPSDYEEE GT:EXON 1|1-336:0| BL:SWS:NREP 1 BL:SWS:REP 1->332|YGJR_ECOLI|7e-55|36.1|324/328| BL:PDB:NREP 1 BL:PDB:REP 1->327|2ho3D|7e-62|43.4|302/303| RP:PDB:NREP 1 RP:PDB:REP 2->312|3ec7A|9e-32|15.9|295/328| RP:PFM:NREP 1 RP:PFM:REP 3->113|PF01408|7e-12|33.9|109/119|GFO_IDH_MocA| HM:PFM:NREP 1 HM:PFM:REP 2->116|PF01408|9.3e-26|29.2|113/120|GFO_IDH_MocA| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01408|IPR000683| RP:SCP:NREP 2 RP:SCP:REP 2->172|1zh8A1|3e-25|25.5|149/181|c.2.1.3| RP:SCP:REP 172->283|1xeaA2|3e-08|9.3|107/144|d.81.1.5| HM:SCP:REP 2->140|1ofgA1|3e-32|31.9|138/220|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 128->294|1ydwA2|8e-17|25.3|166/0|d.81.1.5|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 774 OP:NHOMOORG 478 OP:PATTERN --------1111111--1------1--1-11-----------------------11-1---------- 312-----------1----------------------2--1--1-1--11113--1-1----1-1-----1----1111---------21---1-----1-3-22213-2--------------------------1-------2----1-----11------11--1231-------------11---1-11211111222-222222223323221134-231333321162------------------1331-22-12213311222231122113332111111111111111111222211111121122---1113-1-43111111121111----111211--11--11--------21131-2--1111-------------------22132222112-22-21-2112--211122122112--1-1-2------1----------11---------------------------------------1------------1111--2-11111-------------3----------------1---------1---------------1-----1-----------11-------------------------------3--1--213------1-------------------------21-113-3333333333-333323333233223333245412-1-12-222222222122122222213--111111111111---------11111-2-11111-3--------1----------1-1-11-----------------------211111111113----21211111--------111111---------------1-----------------------1--1----21 --------------112121112121---1111--11----2-1111124255412---111-11---------1----1-11-1-12-162221222311-3222---21-21-2--------11-1------1---------------1--------111121--1113--1-----------1--121---35441 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 329 STR:RPRED 97.9 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHTcTTEEEEEEEcccTTHHHHHHHHHTcccEEEccHHHHHHcTTccEEEEcccGGGHHHHHHHHHHTTcEEEEEccccccHHHHHHHHHHHHHHTccEcEEEEcGGGcHHHHHHHHHHHHHHTTHTTTccEEEEEEEEcccTTcEcccccTTccTTHHHHTTHHHHHHHHHHHTccEEEEEEEcccccTTcccccEEEEEETTccEEEETTcccccEEEEEEEEcccEEccccccTccEEEETTEEEEcccccGGTcHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHccc####### DISOP:02AL 333-337| PSIPRED cEEEEEEcccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHccccEEEccHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHccccccEEEEEEEEEEccccccccccccccccHHHcccEEEHHHHHHHHHHHHHccccEEEEEEEEEcccccccEEEEEEEEccEEEEEEEEEccccccEEEEEEccEEEEEcccccccEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccc //