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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00117.1
DDBJ      :             Muramidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  342/915 : Eukaryota  2/199 : Viruses  2/175   --->[See Alignment]
d.2.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->216 3fi7A PDBj 7e-29 46.9 %
:RPS:PDB   70->215 153lA PDBj 4e-12 11.3 %
:RPS:SCOP  70->215 153lA  d.2.1.5 * 2e-12 11.3 %
:RPS:PFM   78->210 PF01832 * Glucosaminidase 3e-27 52.0 %
:HMM:PFM   76->212 PF01832 * Glucosaminidase 3.2e-44 47.7 132/134  
:HMM:PFM   27->68 PF05814 * DUF843 0.00046 23.8 42/83  
:BLT:SWISS 68->216 LYTG_BACSU 2e-36 49.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00117.1 GT:GENE ABE00117.1 GT:PRODUCT Muramidase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1357680..1358336) GB:FROM 1357680 GB:TO 1358336 GB:DIRECTION - GB:PRODUCT Muramidase GB:NOTE COG1705 [NU] Muramidase (flagellum-specific) GB:PROTEIN_ID ABE00117.1 GB:DB_XREF GI:90821478 LENGTH 218 SQ:AASEQ MARKRTQNKKTVKKRRKKAKFKFLYVNGKLRLSDLLLVVILLSLLFVQFIKWSGVNNNTQMTKIEDVKKEEFVEKIAPIAQDEQRKYHIFASITIAQAALESNWGQSELATQYYNLFGVKSDTGGLMTTKEYVNGQWIVVRARFAIYQSWRESIEQHTALFVDGTSWDSSHYQAVLSADNYVEAAQALQQRGYATDPNYAQKLISLIKTYNLDKYDNN GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 68->216|LYTG_BACSU|2e-36|49.0|149/282| TM:NTM 1 TM:REGION 31->53| SEG 3->22|rkrtqnkktvkkrrkkakfk| SEG 30->45|lrlsdlllvvillsll| BL:PDB:NREP 1 BL:PDB:REP 69->216|3fi7A|7e-29|46.9|147/177| RP:PDB:NREP 1 RP:PDB:REP 70->215|153lA|4e-12|11.3|142/185| RP:PFM:NREP 1 RP:PFM:REP 78->210|PF01832|3e-27|52.0|127/133|Glucosaminidase| HM:PFM:NREP 2 HM:PFM:REP 76->212|PF01832|3.2e-44|47.7|132/134|Glucosaminidase| HM:PFM:REP 27->68|PF05814|0.00046|23.8|42/83|DUF843| GO:PFM:NREP 2 GO:PFM GO:0004040|"GO:amidase activity"|PF01832|IPR002901| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01832|IPR002901| RP:SCP:NREP 1 RP:SCP:REP 70->215|153lA|2e-12|11.3|142/185|d.2.1.5| OP:NHOMO 491 OP:NHOMOORG 346 OP:PATTERN -------------------------------------------------------------------- 21-------------------------------------------------------------------------------1------2111-111---11111111--1-----------------------------------------------------------------------------------1-----1-----------11-1------2---66666641-1111111111111111111622211242223255113223244242324263111-----------4654543434443-11322---2----11111111-1--2--1----3---1----------------------------------------------11-11----1--------------------------------------------------------------------------------------------111111111112111111111111111111111--111111111--111111111121-------111-11-----------------------------------------------------------11-1111111-1111111111111111111---11-1------11111111111111111-1111111111111111111---1111111111111111111111--111111-111111111111---------1111--111------1------------------1111111111111111111----------111111111111111111111112--------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------1---- -----------------------------------------------------------------------------------------------------------1----------------------------------------1-------------------------- STR:NPRED 148 STR:RPRED 67.9 SQ:SECSTR ####################################################################HHHHHHTTHHHHHHHHHHHTccHHHHHHHHHHHHTTTTTccTcTTccEETTTTEETTTccccccTTcHHHHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHHHHcTcccGGGccccTTTTTTcGGGcHHHHHHHHHHHHHHTTcc## DISOP:02AL 1-17,62-65,217-219| PSIPRED cccHHHHHHHHHHHHHHHccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccEEEEEcccccccccEEEEccEEEEEcccccccccHHHHHHHHHHHHHcccccccHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHccc //