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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00122.1
DDBJ      :             Transcriptional regulator, MarR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   67->137 1p4xA PDBj 2e-04 28.2 %
:RPS:PDB   6->133 2a61A PDBj 1e-10 18.0 %
:RPS:SCOP  3->136 2ethA1  a.4.5.28 * 9e-12 15.7 %
:HMM:SCOP  1->143 1jgsA_ a.4.5.28 * 1.1e-19 24.8 %
:HMM:PFM   39->88 PF01047 * MarR 1e-08 24.0 50/59  
:HMM:PFM   78->112 PF00749 * tRNA-synt_1c 0.00049 20.0 35/314  
:BLT:SWISS 67->137 SARS_STAAW 5e-04 28.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00122.1 GT:GENE ABE00122.1 GT:PRODUCT Transcriptional regulator, MarR family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1362833..1363267) GB:FROM 1362833 GB:TO 1363267 GB:DIRECTION - GB:PRODUCT Transcriptional regulator, MarR family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABE00122.1 GB:DB_XREF GI:90821483 LENGTH 144 SQ:AASEQ MSNSIQRAMVNLTQLIRLHDYYEGAVELDKLGAIDMYYLEAINQLDNPTIGTISKLLGQSTPNTNYHIKKLTSLGLVTKKIDDEDRRVTHLSVTEDYTNALAQQSEFWDNLQERLEDEVSPRDLAIFKRVLRQTTEFIAENNPR GT:EXON 1|1-144:0| BL:SWS:NREP 1 BL:SWS:REP 67->137|SARS_STAAW|5e-04|28.2|71/250| BL:PDB:NREP 1 BL:PDB:REP 67->137|1p4xA|2e-04|28.2|71/250| RP:PDB:NREP 1 RP:PDB:REP 6->133|2a61A|1e-10|18.0|128/142| HM:PFM:NREP 2 HM:PFM:REP 39->88|PF01047|1e-08|24.0|50/59|MarR| HM:PFM:REP 78->112|PF00749|0.00049|20.0|35/314|tRNA-synt_1c| RP:SCP:NREP 1 RP:SCP:REP 3->136|2ethA1|9e-12|15.7|134/140|a.4.5.28| HM:SCP:REP 1->143|1jgsA_|1.1e-19|24.8|133/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 140 STR:RPRED 97.2 SQ:SECSTR HTTcHHHHHHHHHHHHHHHHHHHTTHHHHTccHHHHHHHHHHHHHccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHH#### DISOP:02AL 1-4,140-145| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccc //