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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00157.1
DDBJ      :             tRNA-dihydrouridine synthase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  844/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:330 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->323 1vhnA PDBj 7e-39 36.7 %
:RPS:PDB   8->237 1amkA PDBj 5e-33 11.9 %
:RPS:SCOP  13->323 1vhnA  c.1.4.1 * 7e-69 34.4 %
:HMM:SCOP  12->322 1vhnA_ c.1.4.1 * 1.1e-89 43.4 %
:RPS:PFM   16->314 PF01207 * Dus 2e-70 45.4 %
:HMM:PFM   16->313 PF01207 * Dus 2.6e-96 43.7 295/310  
:BLT:SWISS 3->328 DUS1_BACSU e-106 56.0 %
:PROS 97->115|PS01136|UPF0034
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00157.1 GT:GENE ABE00157.1 GT:PRODUCT tRNA-dihydrouridine synthase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1413902..1414894) GB:FROM 1413902 GB:TO 1414894 GB:DIRECTION - GB:PRODUCT tRNA-dihydrouridine synthase GB:NOTE COG0042 [J] tRNA-dihydrouridine synthase GB:PROTEIN_ID ABE00157.1 GB:DB_XREF GI:90821518 LENGTH 330 SQ:AASEQ MEWEIGDIVIPNQVVVAPMAGVTNVAFRMICKEFGAGLVVCEMISDKGIHFRNKKTLDMLFVDPTEHPVSVQIFGGSKETLVEAAQFVAENTATDIIDINMGCPVPKVTKTDAGARWLLDPDKIYEMVHAVTSSIDKPVTVKMRTGWDEDHILAVENALAAEEGGAKALAMHGRTRKQLYTGHADWGILKEVADHLTKIPFMGNGDVRTPEEAKKMLDEVGADAVMIGRAALGNPWIVKQTTHYLETGEILEEPTPAEKIKVAKEHLHRLVKAKGEVIGPKEFRSQAAYYLKGIPRSARTKAALNSADTEAEMIDIFDNFLADTLARQAV GT:EXON 1|1-330:0| BL:SWS:NREP 1 BL:SWS:REP 3->328|DUS1_BACSU|e-106|56.0|325/333| PROS 97->115|PS01136|UPF0034|PDOC00874| SEG 153->170|lavenalaaeeggakala| BL:PDB:NREP 1 BL:PDB:REP 13->323|1vhnA|7e-39|36.7|294/299| RP:PDB:NREP 1 RP:PDB:REP 8->237|1amkA|5e-33|11.9|202/250| RP:PFM:NREP 1 RP:PFM:REP 16->314|PF01207|2e-70|45.4|295/303|Dus| HM:PFM:NREP 1 HM:PFM:REP 16->313|PF01207|2.6e-96|43.7|295/310|Dus| GO:PFM:NREP 4 GO:PFM GO:0008033|"GO:tRNA processing"|PF01207|IPR001269| GO:PFM GO:0017150|"GO:tRNA dihydrouridine synthase activity"|PF01207|IPR001269| GO:PFM GO:0050660|"GO:FAD binding"|PF01207|IPR001269| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01207|IPR001269| RP:SCP:NREP 1 RP:SCP:REP 13->323|1vhnA|7e-69|34.4|302/305|c.1.4.1| HM:SCP:REP 12->322|1vhnA_|1.1e-89|43.4|302/305|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 1857 OP:NHOMOORG 1033 OP:PATTERN -------------------------------------------------1111--------------1 111-111111111111111-11111111111111111111----11111111111111--1111111111-11111111111-1----222212111--111111211111111111111111121111111111111111---1-221122211222222222211222122122222221212111--1112222222222222222111122222-1131221111111211111111111111111111211111111112211111111111111111111111111111111111111111111111111111111111211111121212111112122111111111111111111111111-121-222211111-222122222122222222222222-11111111222122222212222212212112111121111111111111111111111111111111111111-11111111111111122222111112111111121111111122323111222122112221121121111322222222111122323232221122221222121222111121111111111111111111111111111--232322323223333332233333333333--11112------22222222222222222-2222222222222222222222222222222222222222222211122221-222222222222--1211111222223223333233312213322333333333323111122222222222332222222221333232332233331111111111----1-113311122112-222211----1---1--------1-------1111111111-22 2222453-41213333211111212121111111-12222222111-1121111-121222133432323324333323333333334-2532444333222255413837374452--1-14263-216H4-547111-4-232231-16--51584447736221544434341457b6663352341533234342 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 330 STR:RPRED 100.0 SQ:SECSTR HHccEEcEEEccGGGHHHHHHHcccTTEEEccccccccccTTcccHHHHHHTTccEEEEHHTTTTccHHHHHHccccHHHHHHHHHHHHHTTcccHTcEEEEEEcccHHHHHTTcHHHHHHHHHHHHHTTccGGGGGGEEEEEccGGGTTTcccccHHHHHHEcTTcccGHHHHHHHHHHHHTcHHHHHHHHHHHHHHccEEEEcccccTTTHHHHHTcTTccEEEEcGGGGcTTHHHHHHHHHHHHTTccEEEccccccHHHHHHHHHHTTcTTcccccccccGGGTcccccccccccccTTEEEcccccHHccHHHHHHHHHHHHHTE DISOP:02AL 1-1,330-331| PSIPRED ccEEEEEEEEcccEEEEcccccccHHHHHHHHHHcccEEEEcccccHHHHcccHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHcccccEEEEEcccccHHHHcccccHHHcccHHHHHHHHHHHHHHccccEEEEEEccccccccEEHHHHHHHHcccccEEEEEEccHHHcccccccHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc //