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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00201.1
DDBJ      :             Dehydrogenase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  149/915 : Eukaryota  128/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->142 3i4fA PDBj 9e-08 25.5 %
:RPS:PDB   2->241 1a27A PDBj 3e-22 21.4 %
:RPS:SCOP  2->241 1a27A  c.2.1.2 * 6e-23 21.4 %
:HMM:SCOP  2->242 1xg5A_ c.2.1.2 * 2.7e-41 27.8 %
:RPS:PFM   5->166 PF00106 * adh_short 3e-11 31.8 %
:HMM:PFM   3->144 PF00106 * adh_short 2.1e-25 26.7 135/167  
:HMM:PFM   165->236 PF00651 * BTB 0.00039 18.3 71/111  
:BLT:SWISS 2->238 RDH11_MOUSE 2e-20 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00201.1 GT:GENE ABE00201.1 GT:PRODUCT Dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1468364..1469218) GB:FROM 1468364 GB:TO 1469218 GB:DIRECTION - GB:PRODUCT Dehydrogenase GB:NOTE COG1028 [IQR] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) GB:PROTEIN_ID ABE00201.1 GB:DB_XREF GI:90821562 LENGTH 284 SQ:AASEQ MKKVIITGGNSGIGYQAAKQLAEKGWSVTLFCRREEAAEQACEEIRQQTGNRHVDYILVDLSDMKSVRKAVEQYIQKEDVLDVLINNAADFDLSVKKPVLTKDGLERQFATNVVAPFLLSILLKGLLEKSESGRIINISSQGLVLYPFMRLDFENLSGQKRYSPAKTYYQNKLALLMLSLYMRKWWKGIKIQAIRVTNVKVDMRRYDHLSAFMKNLYKIKSKFSISPEEMAKVYTALSTEDGYDGFLYDEKCREVKANRTAYEEEGQTKLYSLLEQLTFSRDNL GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 2->238|RDH11_MOUSE|2e-20|36.0|228/316| SEG 32->48|crreeaaeqaceeirqq| SEG 118->133|llsillkglleksesg| BL:PDB:NREP 1 BL:PDB:REP 1->142|3i4fA|9e-08|25.5|141/242| RP:PDB:NREP 1 RP:PDB:REP 2->241|1a27A|3e-22|21.4|220/285| RP:PFM:NREP 1 RP:PFM:REP 5->166|PF00106|3e-11|31.8|148/169|adh_short| HM:PFM:NREP 2 HM:PFM:REP 3->144|PF00106|2.1e-25|26.7|135/167|adh_short| HM:PFM:REP 165->236|PF00651|0.00039|18.3|71/111|BTB| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 2->241|1a27A|6e-23|21.4|220/285|c.2.1.2| HM:SCP:REP 2->242|1xg5A_|2.7e-41|27.8|227/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 789 OP:NHOMOORG 283 OP:PATTERN ------------------------1--1-121--------------1--------------------- 1-1-----------21111-121121111111-1211-11---31--1-11--11------1--2-1212------------1-----1111---------3---3-31----------------1----1----111112---2-3-1----1-------1-2----12-1112111112111-------1-----------------11-----------1---------1---------------1--------11------------1--------------1--------------------------1------------------------------------------------------1----1-2---------1-2-----11-12------------11-11-1-----1------12-----141--------------------------------------------------------2---------12212-1--------1111-11----------------------------------------------2--------------1--------1-12-------------------------------------2-1---------------1--1--------------------------------------------------------------------------------------------------------------2-1----------------111111------1111--1-1-----------------------------1------1-------------11----------------------------------------1--1--------- ---111------222221-2-112223-------11-----11---1-233344--------------------------1----111-1922351---1121421-5-2aFJDDG3122225575162DY7-5555221625642331-4137434765A53B7D3A67I346D--1-E12-211334-66319245- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 275 STR:RPRED 96.8 SQ:SECSTR cEEEEEcccccHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHHHHHHHTTcEEEEEccTTcHHHHHHHHHTHHcTTccccEEEEccccccccccccGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEGTcccccTTccHHHHGGGTcccTTcHHHHHHHHHHHHHHHHHHHHHGTEEEEEEEEccccccTTTHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccTTHHHHHHccccHHHHHHHHHHHHHTcccccHHH######### DISOP:02AL 41-41,45-46| PSIPRED cEEEEEEccccHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccEEccccccccccHHHccHHHHHHHHHHHHHHHcccccc //