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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00259.1
DDBJ      :             Magnesium and cobalt efflux protein corC
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  861/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.37.1
:439 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   225->344 3hf7A PDBj 2e-08 28.3 %
:RPS:PDB   132->344 3bp1B PDBj 7e-35 9.9 %
:RPS:PDB   356->434 3dedB PDBj 5e-07 24.7 %
:RPS:SCOP  218->342 2yzqA1  d.37.1.1 * 5e-19 18.2 %
:RPS:SCOP  356->434 2p3hA1  d.145.1.4 * 2e-09 18.4 %
:HMM:SCOP  218->279 1nf7A3 d.37.1.1 * 2.9e-10 33.3 %
:HMM:SCOP  284->342 1nf7A3 d.37.1.1 * 1.1e-08 27.1 %
:RPS:PFM   32->206 PF01595 * DUF21 6e-18 34.2 %
:RPS:PFM   292->338 PF00571 * CBS 3e-04 42.6 %
:HMM:PFM   9->207 PF01595 * DUF21 3.2e-48 32.0 181/183  
:HMM:PFM   223->279 PF00571 * CBS 1.1e-08 26.4 53/57  
:HMM:PFM   294->340 PF00571 * CBS 3.8e-09 29.8 47/57  
:HMM:PFM   362->435 PF03471 * CorC_HlyC 8.8e-11 31.0 71/81  
:BLT:SWISS 33->434 YUGS_BACSU 2e-47 29.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00259.1 GT:GENE ABE00259.1 GT:PRODUCT Magnesium and cobalt efflux protein corC GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1515664..1516983) GB:FROM 1515664 GB:TO 1516983 GB:DIRECTION - GB:PRODUCT Magnesium and cobalt efflux protein corC GB:NOTE COG1253 [R] Hemolysins and related proteins containing CBS domains GB:PROTEIN_ID ABE00259.1 GB:DB_XREF GI:90821620 LENGTH 439 SQ:AASEQ MSSGQAVSNLIVVVIVFFFAAFFVAAEFAIVSVRKSQIESMLEDGEGNKKKLEMALKMVDNMNEYLSTTQVGVSLTGIILGWLGADTLSQIFADFFGFTPLNHTTIMAISAVLGVVLLTYLEVVLTEIVPKNISIDMPMKVMMFVVRPLHYFHILFYPFVWLLNASANGIVKAMGLKPAGEDIDVLSENEILNLSKNAVTGGSIDKEDYLYMRRAFEFNDKVAKDVMIDRTSVEVVDITATIKDVLNKYLQEKHSRYPVVANNDKDKILGYVYIYDLIRQSRVDDTIKISKLLRTIISVPETTELQGLLRQMTRKRVPMVVVLDEYGGTSGIVTDRDIYEEVFGTVLDEADDVLPDDIIDNHNGTYKVSGKTTLYDFERYFGFQEKDFLESESVTLAGYLQDNYKIQLGTEVELGGLKVKVTEFNRNYVDWVEVCEMKK GT:EXON 1|1-439:0| BL:SWS:NREP 1 BL:SWS:REP 33->434|YUGS_BACSU|2e-47|29.0|390/429| TM:NTM 4 TM:REGION 10->32| TM:REGION 65->87| TM:REGION 105->127| TM:REGION 139->161| SEG 11->31|ivvvivfffaaffvaaefaiv| SEG 112->127|vlgvvlltylevvlte| BL:PDB:NREP 1 BL:PDB:REP 225->344|3hf7A|2e-08|28.3|120/127| RP:PDB:NREP 2 RP:PDB:REP 132->344|3bp1B|7e-35|9.9|212/250| RP:PDB:REP 356->434|3dedB|5e-07|24.7|77/83| RP:PFM:NREP 2 RP:PFM:REP 32->206|PF01595|6e-18|34.2|158/184|DUF21| RP:PFM:REP 292->338|PF00571|3e-04|42.6|47/56|CBS| HM:PFM:NREP 4 HM:PFM:REP 9->207|PF01595|3.2e-48|32.0|181/183|DUF21| HM:PFM:REP 223->279|PF00571|1.1e-08|26.4|53/57|CBS| HM:PFM:REP 294->340|PF00571|3.8e-09|29.8|47/57|CBS| HM:PFM:REP 362->435|PF03471|8.8e-11|31.0|71/81|CorC_HlyC| RP:SCP:NREP 2 RP:SCP:REP 218->342|2yzqA1|5e-19|18.2|121/124|d.37.1.1| RP:SCP:REP 356->434|2p3hA1|2e-09|18.4|76/98|d.145.1.4| HM:SCP:REP 218->279|1nf7A3|2.9e-10|33.3|60/0|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 284->342|1nf7A3|1.1e-08|27.1|59/0|d.37.1.1|2/2|CBS-domain| OP:NHOMO 2273 OP:NHOMOORG 895 OP:PATTERN ------------------------322233221----------12122---11-------------12 2221413544433323333-35--3333333-55554345253553436443756233--224253458822222222112-2222223333-322---223133424112111111222----2221112221312222211122244233222111111112213233221112221112232311111-344444443444444442-5435445322234333333343222222222222222222231212222222311222221111121111111111111111111111111111111111111111111111-22231112222212123312222-122122-13311-11-------11231-333311121223332223333333333333333-112114122332322233333333112323243333222333333332222233422222222112222122222222222222-22222333233333333333333333333233333333123333243343223222523234322222222223332122224322232322222222223333331211111111111121111111-1--122554333223424444434644444543424--3422211-11155444554444444443-3444444444344444444555444445555445444554555544455542-55555554455512332222233332323333333333332233333333334325333434333334333334332323323244434444434444333333333222222243111111222222223121111-------11------1--1111111111111113 ------------------------------------------------------------------------------------------------------------2-------------------------------------------------2----------------1--17111--41-2-211-2---3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 67.9 SQ:SECSTR ###################################################################################################################################TcccccccEEEEEEEEEEEEEcTTccEEEEEEEEEEETTccEEEcHHHHHHHHHTcccccHHHHHHHHHHHHHHHHTcccEEEEEEGGGGTTcccccccEEccccccccccccccGGGGTTcEEEEEEEcEEEEEEEEEEcccEEEEEEEEEEEEEcHHHHHHHHHTHHHHHHHHHHHHHTcccEEEEEEEEcccTTEEEEEEEEccccccccHHTTcccG###ccEEEcTTccEEEET#ccHHHHHHHHTcccccTTGcccccHHHHHHHHccccTTcEEEETTEEEEEEEET#TEEEEEEE##### DISOP:02AL 1-6,8-8,41-51,180-185,201-201,438-440| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHccccEEEEEEEEEcccEEEEEccccHHHHHHHHHHccccEEEEEEEcccccEEEEEEHHHHHHHHcccccccHHHHccccEEEcccccHHHHHHHHHHccccEEEEEEccccEEEEEEHHHHHHHHHccccccccccccccEEEEcccEEEEEEEccHHHHHHHHccccccccccccccHHHHHHHccccccccEEEEccEEEEEEEEcccEEEEEEEEEccc //