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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00271.1
DDBJ      :             Succinyl-diaminopimelate desuccinylase
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  754/915 : Eukaryota  143/199 : Viruses  0/175   --->[See Alignment]
c.56.5
:378 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->355 1vgyA PDBj 2e-23 28.3 %
:RPS:PDB   7->374 3ct9B PDBj 8e-48 21.2 %
:RPS:SCOP  7->253 1q7l.1  c.56.5.4 * 2e-42 12.7 %
:RPS:SCOP  295->375 1vgyA1  c.56.5.4 * 8e-04 17.3 %
:HMM:SCOP  5->375 1lfwA1 c.56.5.4 * 2.1e-59 33.6 %
:RPS:PFM   68->343 PF01546 * Peptidase_M20 5e-18 33.8 %
:HMM:PFM   66->372 PF01546 * Peptidase_M20 6.8e-34 30.1 166/171  
:BLT:SWISS 1->374 DAPE_STAES 4e-84 43.3 %
:PROS 64->73|PS00758|ARGE_DAPE_CPG2_1
:PROS 100->138|PS00759|ARGE_DAPE_CPG2_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00271.1 GT:GENE ABE00271.1 GT:PRODUCT Succinyl-diaminopimelate desuccinylase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1527832..1528968) GB:FROM 1527832 GB:TO 1528968 GB:DIRECTION - GB:PRODUCT Succinyl-diaminopimelate desuccinylase GB:NOTE COG0624 [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases GB:PROTEIN_ID ABE00271.1 GB:DB_XREF GI:90821632 LENGTH 378 SQ:AASEQ MNEMDKIKVLADIVEIPSVNDDEVSVAKYIRDLFAKYGIESKILKVKGNRANLVAEIGEKGPILGFSGHLDVVAAKESDGWHSDPFKLVERDGKLYGRGTSDMKSGVAAMIVSLIELQQKGLKNGRIRLMLTMGEEIGEEGSAYFYEHGYMKDVSALVISEPTYYRIIYAEKGSLDLKITSRGKAAHSSMPNLGYNAVNPLIELLSELNEFFSNPPKNDVLGPLTFNVTVFKGGEQVNTIPDYAEAEINVRTLPNFDGNDVIKKLDEYLEKKNENGATLTREVLMNEDAVLKSPDSVIADLAAEIVESRGREVVKTIAPGITDASNLLKEKKEDYPFIVFGPGNPLVSHQVDEYVEKKAYLDFIDIYQELAEKYFIND GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 1->374|DAPE_STAES|4e-84|43.3|372/405| PROS 64->73|PS00758|ARGE_DAPE_CPG2_1|PDOC00613| PROS 100->138|PS00759|ARGE_DAPE_CPG2_2|PDOC00613| BL:PDB:NREP 1 BL:PDB:REP 3->355|1vgyA|2e-23|28.3|339/370| RP:PDB:NREP 1 RP:PDB:REP 7->374|3ct9B|8e-48|21.2|326/338| RP:PFM:NREP 1 RP:PFM:REP 68->343|PF01546|5e-18|33.8|260/308|Peptidase_M20| HM:PFM:NREP 1 HM:PFM:REP 66->372|PF01546|6.8e-34|30.1|166/171|Peptidase_M20| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 2 RP:SCP:REP 7->253|1q7l.1|2e-42|12.7|244/280|c.56.5.4| RP:SCP:REP 295->375|1vgyA1|8e-04|17.3|78/262|c.56.5.4| HM:SCP:REP 5->375|1lfwA1|2.1e-59|33.6|241/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 2059 OP:NHOMOORG 955 OP:PATTERN 1123222322222134132222233--3115----22111111111111----223444333113111 2391321111121-22211-1111151111111111142-11112112111-223212--3222111333111111112---31-211111111---111-1-1112221--------------------------34433---12--1----------------------------------12-11112-13333333333343334443342334223421-11111172-2222212222222254434416144141113344531311-331311221222111111111111122222222222221221111222-31122222222121-7--211122-1----1122-1--1312112-21-4-1444211111224341123324111111111112-223225271421533222222232431121344344443222222224332121111-11111--11111111111111111-122332135435333243222223333222222334655711555223114252841211111221111111111111-23-111311122--111----1-1111522-121111111111111111111111111322222322222111112411113132132--1232221122222424223333333333-3333333333333333333463222232222222222222222232222232122222222222211131111123342124422221221111211311111122222244434457243442657---------13336222223322211-1-11---11111111111111-----1111--1-1-----1--------1-------132332222214- ----212-731-12242623333535333----333331333312243223444232112122111------22111---1--------162212111-1---121-2-33232244-12-31345-328Q3-473-21-51252-221-3117321461111431471-148-1----------1--3223115255- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 376 STR:RPRED 99.5 SQ:SECSTR TTHHHHHHHHHHHHHccccTTccHHHHHHHHHHHHTTTccEEEEEccTETTEEEEEcTccccEEEEEEEccccccTTGGHccccccccEEETTEEEcTTTTTTHHHHHHHHHHHHHHTTccccccEEEEEEEccTTTTcTTcGGGTHTTTcccccEEEEccccccTccEEEEcccEEEEEEEcccccTTcccccccTTGGGHHHHHHHHHcccTTccccTTTcccEEEEEEEEcccTTccccEEEEEEEEEccTTccHHHHHHHHHTTcccEEEcccccccEEccTTcHHHcHHHHHHHHHHHHHHHTTcHHHHHTcccEEEccccGGGGccccEEEEEcccccGGGTTcTTcEEHGHHHHHHHHHHHHHHTTcHc## DISOP:02AL 1-1| PSIPRED ccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccEEEEEEccccEEEEEEEEcccccEEEEEEEcccccccccccccccccEEEEEccEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHccccccccEEEEcccccccEEEEEEEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEccccccEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHcccccEEEEEccccHHHcccccccEEHHHHHHHHHHHHHHHHHHHHcc //