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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00272.1
DDBJ      :             Short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  877/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->248 1q7bB PDBj 6e-30 32.8 %
:RPS:PDB   7->251 2ae1A PDBj 7e-40 21.2 %
:RPS:SCOP  13->251 1pwxA  c.2.1.2 * 1e-45 20.1 %
:HMM:SCOP  5->248 1zemA1 c.2.1.2 * 2.3e-77 38.3 %
:RPS:PFM   10->141 PF00106 * adh_short 6e-16 34.4 %
:HMM:PFM   10->173 PF00106 * adh_short 1.2e-30 23.9 159/167  
:BLT:SWISS 8->251 BDH2_MOUSE 3e-34 36.6 %
:PROS 143->171|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00272.1 GT:GENE ABE00272.1 GT:PRODUCT Short chain dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1529115..1529873) GB:FROM 1529115 GB:TO 1529873 GB:DIRECTION - GB:PRODUCT Short chain dehydrogenase GB:NOTE COG1028 [IQR] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) GB:PROTEIN_ID ABE00272.1 GB:DB_XREF GI:90821633 LENGTH 252 SQ:AASEQ MNLYPEFEGKVVVMTGVSSGIGLEQAKAFLQAGAIVYGADVKESAEIKEVEQKFPTLSFQQVDIRKKKDIHMWTEKIKKEISTVDILLNTAGILDNYAPTLDTNEEQWDNIFNTNLKSMFLLTNEILPVMLKQKHGVIVNMASIAGLVAGGGGAAYTAAKHGIIGYTKQLAYDYADKGIRVNCIAPGAINTPMNAADFAGDGAMAKEVARLTPAKRWAKPKEVAEMTLYLASPRADYVHGTVFTIDGGWTVK GT:EXON 1|1-252:0| BL:SWS:NREP 1 BL:SWS:REP 8->251|BDH2_MOUSE|3e-34|36.6|235/245| PROS 143->171|PS00061|ADH_SHORT|PDOC00060| SEG 142->162|asiaglvaggggaaytaakhg| BL:PDB:NREP 1 BL:PDB:REP 7->248|1q7bB|6e-30|32.8|235/241| RP:PDB:NREP 1 RP:PDB:REP 7->251|2ae1A|7e-40|21.2|240/252| RP:PFM:NREP 1 RP:PFM:REP 10->141|PF00106|6e-16|34.4|131/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 10->173|PF00106|1.2e-30|23.9|159/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 13->251|1pwxA|1e-45|20.1|234/252|c.2.1.2| HM:SCP:REP 5->248|1zemA1|2.3e-77|38.3|243/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 12194 OP:NHOMOORG 1122 OP:PATTERN 2211234897978775171321119228457811---------21143--622-23212133844-34 GFU2S1-322925-KXSBB-Bf22QtBABBBKhillOc**5O5vJDA31A92JCE63711BEL2DDTOPJC11111121287N22323877727331--65O5DCi9O4F11111111111111355268224563DFFEE222ECDAF95353222111422262ADAQ5112121112321DC689771G7PFFFFFIGIFHHGIJGKHOOGLFGHAHHILFB888887Gb955555435555554A99AB83A28B252329C5599665586867657576734444444454444465566676666635522155574358E5554444547846627866331188222A7123325333355524B2AXCCH12212D9yVX459LLMKEIJJIHHIHJJT-BHKD9bCMQlQ1qaaJYVe*wmjkTWBGBLHQOCMPHCG66666666HOJC6897111111111111223332311221211118CelB8FZQHSmdhgjgMLKLJZZooOMONAKwQ*PugW48JJIF7FCBNFUFfc8D54769842332222236IE67J35411211433226974B6384A989IK34255425444632533333332343344AA699CB7J95587697BC7766859876A1-33237111111DGDC5K8DFFBDCCCDD-FCEDDCCDDDFCFCCDDCENSOCA87BB89AAABAABA9A9AARBCAAA9D317888988889A9111635323988938FLE111638112221351EFGJG5D498I8KLJKEJNUCGEJJFKFI4322253231445E6666687588GGDEEED98875551136A97655--------1-4----2---2-1------2-------3442164676393 11--76B-1-1-4ABRVQMOPVQeYfbEE8DCDDEBANFJDLKCAAQNNQTfutJPKFEDAF87E3754753B9824234498A9928-DM8V9L9877899BEA8-7H7*JSFDIC52534B3FD2D4MtE-BCD6274E47G858435E-6B7CAGJZYNBXNIEKCDMBKHD4682Z2225BAQQsKdBA8MABF7 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 100.0 SQ:SECSTR cccHHccTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHTTTcccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEEccGGGTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHHHccHHHHHHHHHHTccccccccHHHHHHHHHHHHcGGGTTccccEEEEcTTGGGc DISOP:02AL 1-3| PSIPRED ccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //