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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00276.1
DDBJ      :             DegV family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  159/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.119.1
:290 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->278 3fysA PDBj 3e-13 21.9 %
:RPS:PDB   1->285 3eglB PDBj 9e-26 19.3 %
:RPS:SCOP  1->280 1pzxA  c.119.1.1 * 4e-34 20.2 %
:HMM:SCOP  1->283 1mgpA_ c.119.1.1 * 4.1e-43 27.5 %
:RPS:PFM   73->280 PF02645 * DegV 3e-21 32.5 %
:HMM:PFM   73->280 PF02645 * DegV 2.9e-29 21.0 205/211  
:BLT:SWISS 1->249 Y1415_STRR6 2e-17 26.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00276.1 GT:GENE ABE00276.1 GT:PRODUCT DegV family protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1532627..1533499) GB:FROM 1532627 GB:TO 1533499 GB:DIRECTION - GB:PRODUCT DegV family protein GB:NOTE COG0718 [S] Uncharacterized protein conserved in bacteria GB:PROTEIN_ID ABE00276.1 GB:DB_XREF GI:90821637 LENGTH 290 SQ:AASEQ MKVAILTDTSACLTVDKIKELNIHQIELSIEFEGSRYPEKTGMTPYLRDKMLDKRTDTPVLEPISTAYLEEYFESLEKEGYDEFLYISLANGISSLPKVVSSYAKTSDRKITVFDSYSSGAIQGQMVELAGKMLLSGKTVSQIVDQLINLRNNNRTYMLISDIYQLMKTGYVSNGVNSMSNLFLRPLTMMKFNENGKLAMVNTHYREKKAYSEVLELIISQYHSMNDQMRITLMGDENNSQFDELYELLQENFPTAKIEKDELPISLAIYTGKKSIGISFGLDWKTVLYE GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 1->249|Y1415_STRR6|2e-17|26.0|242/282| BL:PDB:NREP 1 BL:PDB:REP 1->278|3fysA|3e-13|21.9|274/282| RP:PDB:NREP 1 RP:PDB:REP 1->285|3eglB|9e-26|19.3|243/249| RP:PFM:NREP 1 RP:PFM:REP 73->280|PF02645|3e-21|32.5|203/210|DegV| HM:PFM:NREP 1 HM:PFM:REP 73->280|PF02645|2.9e-29|21.0|205/211|DegV| RP:SCP:NREP 1 RP:SCP:REP 1->280|1pzxA|4e-34|20.2|263/278|c.119.1.1| HM:SCP:REP 1->283|1mgpA_|4.1e-43|27.5|280/285|c.119.1.1|1/1|DAK1/DegV-like| OP:NHOMO 283 OP:NHOMOORG 159 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------1----------------------------------------------------------------1------------------------------------------------2122222222222222221222122221121223222221111112112-1111112222223312222332442211234115322332111111122222222222--11---------2121112222-122-2222222222--22-21221-22-1------1-222--11---1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-----------------------------------------------------------------------------------------------------------3111-----------------------2----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 285 STR:RPRED 98.3 SQ:SECSTR cccEEEEEGGGcccHHHHHHTTcEEEccEEEETTEEEcTTTTccHHHHHHHHHTTEEccEEEcccHHHHHHHHHHHHHHTTccEEEEcccTTcTHHHHHHHHHTTccTTTEEEEcccccTHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTEEEEEEccccHHHHHTTcccHTHHHHHHcccccEEEEEEcETTEEEEEcccHHHHHHHHHHHHHHTTcccTTTTccEEEEEEEEccHHHHHHHHHHHHHccTTcEEEEEccHHHHHHHcTTEEEEEEEEccc##### PSIPRED cEEEEEEEccccccHHHHHHcccEEEEEEEEEccEEEEccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcEEEEEEccHHHHHHccccHHHHHHHHHHHccEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEccccEEEEEccccEEEEEEEEcccHHHcc //