[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00280.1
DDBJ      :             Hydrolase, HAD superfamily
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  433/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:277 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->274 1rkqA PDBj 4e-28 34.7 %
:RPS:PDB   3->268 3dnpA PDBj 5e-21 18.8 %
:RPS:SCOP  3->272 1nrwA  c.108.1.10 * 2e-38 28.4 %
:HMM:SCOP  1->275 2b30A1 c.108.1.10 * 3.1e-64 34.7 %
:RPS:PFM   5->268 PF08282 * Hydrolase_3 6e-26 36.7 %
:HMM:PFM   5->267 PF08282 * Hydrolase_3 3.3e-61 33.6 253/254  
:BLT:SWISS 3->274 YIDA_SHIFL 1e-27 34.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00280.1 GT:GENE ABE00280.1 GT:PRODUCT Hydrolase, HAD superfamily GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1534756..1535589) GB:FROM 1534756 GB:TO 1535589 GB:DIRECTION - GB:PRODUCT Hydrolase, HAD superfamily GB:NOTE COG0561 [R] Predicted hydrolases of the HAD superfamily GB:PROTEIN_ID ABE00280.1 GB:DB_XREF GI:90821641 LENGTH 277 SQ:AASEQ MYKLVAIDMDETLLNDDAEISPKNVSVLKKAIKDGVKVVLNTGRSYLSVQENLKTLGIYQTKDQYVVSFNGGAIVENKDLKVVHVEGLTFDIVKQLFDISLRYYPESCIHVYTLDELYMWNVNQDEKDYLQPRGVEWTELQEPNIDFLEDTPITKIIINVNDMDKRLAFNEIARKEIGDKFKTTYSSGRYIEFNNISTDKGTGMLKLAEMLGIKPEETIAIGDNSNDLPMIEAAGVGVAVRNANEQVLSKADYICKRDNNHDAVAEAVDKFVYNKID GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 3->274|YIDA_SHIFL|1e-27|34.7|259/270| SEG 233->240|aagvgvav| BL:PDB:NREP 1 BL:PDB:REP 3->274|1rkqA|4e-28|34.7|259/271| RP:PDB:NREP 1 RP:PDB:REP 3->268|3dnpA|5e-21|18.8|255/268| RP:PFM:NREP 1 RP:PFM:REP 5->268|PF08282|6e-26|36.7|251/253|Hydrolase_3| HM:PFM:NREP 1 HM:PFM:REP 5->267|PF08282|3.3e-61|33.6|253/254|Hydrolase_3| RP:SCP:NREP 1 RP:SCP:REP 3->272|1nrwA|2e-38|28.4|264/285|c.108.1.10| HM:SCP:REP 1->275|2b30A1|3.1e-64|34.7|271/0|c.108.1.10|1/1|HAD-like| OP:NHOMO 1118 OP:NHOMOORG 450 OP:PATTERN ----------------------------------1--------------------------------- -1-----1----1--1111-11111-11111111111111---------------1------21111----1111---2---------2221-2------12-1--1----------------------------------11----11-11111--------11--111----------------------15555554545556445355545555122-2136666441414444444444444444443483444347366733562443452338883444455333333333332222222222222344223344722159444444494625115666-3151-22-111111111112222224------------1----------------------------1----------------------------------11111111111-1-------------------------------------------111111111111111111111111-----------------------------------------------------------------------------------------------------223-------2-----------------------------11-22222333333333333-3233333332333333333222333132221122111222212322233331-333333333333--1---------------3333322-1--1121-------------------1------111----------2222222222343311---------------3-----111121221--1----3-4-423-1222-44111221221221-111--1 31------51-----------------------------------------------------------------------------1---------------1-----------------------------------------------------------1--------------1--11---111-11--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 100.0 SQ:SECSTR cccEEEEccccccccTTccccHHHHHHHHHHHHTTcEEEEcccccHHHHHHHHHHTTcGcHHcccEEEGGGTEEEccTTEcccEEccccHHHHHHHHHHHHTcccEEEEEEEccccEEEcccccccHHHHHcccccccTEEcccHHHHHHccccccEEEEEccGGGHHHHHHHHHHHcTTEEEEEEETTEEEEEETTccHHHHHHHHHHHTTcccGGEEEEEccGGGHHHHHccEEEETETTccHHHHHHccEEccccTTTTHHHHHHHHTcHTcHc PSIPRED cEEEEEEEcccccccccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccccccEEEEEccEEEEEcccccEEEEccccHHHHHHHHHHHHHHccccEEEEEEcccEEEEEcccHHHHHHHHHcccccccccccHHHcccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEcccEEEEEcccccHHHHHHHHHHHHcccHHHEEEEEccccHHHHHHHcccEEEEccccHHHHHHccEEEcccccccHHHHHHHHHHHHccc //