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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00281.1
DDBJ      :             Transcriptional regulator, LytR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  299/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:378 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   141->206 1rj5B PDBj 9e-05 28.8 %
:RPS:PFM   116->257 PF03816 * LytR_cpsA_psr 5e-37 56.2 %
:HMM:PFM   116->259 PF03816 * LytR_cpsA_psr 3.2e-47 45.4 141/148  
:HMM:PFM   44->67 PF11084 * DUF2621 8.2e-05 50.0 24/141  
:BLT:SWISS 65->339 LYAT_ENTFA 5e-55 42.2 %
:PROS 52->80|PS00061|ADH_SHORT
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00281.1 GT:GENE ABE00281.1 GT:PRODUCT Transcriptional regulator, LytR family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1535689..1536825) GB:FROM 1535689 GB:TO 1536825 GB:DIRECTION - GB:PRODUCT Transcriptional regulator, LytR family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABE00281.1 GB:DB_XREF GI:90821642 LENGTH 378 SQ:AASEQ MPSRRDDNYVVQSDENGYIDTEHMTRSQRYHQRNNKPKKKGHKLLWSVIVIVVAIIGGFYAYRKYTNAKQAANAIYSSTQVTKARNVSDALKKKRPISILLMGTDTGALGRDFKGRTDTMILCVLNPEDKKMTLVSLPRDTEVAVYGYEDYFPSKINSAYEYGGSATAVKTVQKFLNVPIDFYATINMGGLEKLIDAVGGVKVEPTISFTYDGYTFKKGKEVNMDGEKALAYVRMRHEDPRGDYGRQERQRQVLTKLAFKSSGLTSLVNQKFLSTISKQMKTDLTFDDLLTLGTKYRVATHDMDSDFLQGTSEMINGESFEVASTTEKQRITNKLREALGLSKAKTGNTLSSDNDVNISSEGEDTNYSNDDNTYYGGY GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 65->339|LYAT_ENTFA|5e-55|42.2|270/303| PROS 52->80|PS00061|ADH_SHORT|PDOC00060| TM:NTM 1 TM:REGION 41->62| SEG 48->56|vivivvaii| SEG 282->294|tdltfddlltlgt| BL:PDB:NREP 1 BL:PDB:REP 141->206|1rj5B|9e-05|28.8|66/257| RP:PFM:NREP 1 RP:PFM:REP 116->257|PF03816|5e-37|56.2|137/145|LytR_cpsA_psr| HM:PFM:NREP 2 HM:PFM:REP 116->259|PF03816|3.2e-47|45.4|141/148|LytR_cpsA_psr| HM:PFM:REP 44->67|PF11084|8.2e-05|50.0|24/141|DUF2621| OP:NHOMO 790 OP:NHOMOORG 301 OP:PATTERN -------------------------------------------------------------------- ----512222221244422-22223222222233333423243522222--3222221--22416557756211111122332--------------------------1--------------------------34433---2212212221122--11-122212222-1-----1----1221111-11366666666666666632554366622242643333335343333333333333333343533433423343422333324421112222222322323333333332222222222222332333333324231222222212112--24445123132211221112111211311-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---11111--- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 66 STR:RPRED 17.5 SQ:SECSTR ############################################################################################################################################cEEccccGGGGcccccccEEEEEEccccTTccccEEEEEEcccEEEcHHHHHHHHccccccccccc############################################################################################################################################################################ DISOP:02AL 1-6,21-39,74-93,110-111,348-357,367-367,370-379| PSIPRED ccccccccEEEEcccccccHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEcccccccccccEEEEEEEEcccccEEEEEEEccccEEEccccccccHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHcccEEEEccccccccccEEccccEEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEEEEEcccEEEccEEEEEEcHHHHHHHHHHHHHHcccccccccccccccEEEccEEEEEccccccccccccccc //