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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00289.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.8
:274 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   49->108 2cg3A PDBj 4e-04 13.5 %
:RPS:SCOP  49->95 2ooeA1  a.118.8.7 * 6e-05 8.5 %
:HMM:PFM   5->55 PF09402 * MSC 5.2e-05 17.6 51/332  
:HMM:PFM   113->148 PF10975 * DUF2802 0.00036 34.3 35/70  
:BLT:SWISS 42->157 SPAST_MOUSE 2e-04 31.4 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00289.1 GT:GENE ABE00289.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1541992..1542816) GB:FROM 1541992 GB:TO 1542816 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:PROTEIN_ID ABE00289.1 GB:DB_XREF GI:90821650 LENGTH 274 SQ:AASEQ MMKRWMFWLITAIVVVLVFVGFGYTKKRETQKQFDNLMSQAITNAQATEYKKAELNLQDALRKKPDDVVAKQRLEQVKLYQEGLAELKQDDYEQAQLTFRSTAKVSPSLSILTQRAKKKDKFLESVLKQREKYDDLYNEAVRLTEMGAYSQSNENLVQILDGKNIDEKYYSQVRKDARELQERNNSILEQIRIQNQQAAIRRQREQQRQEEARKAQQAAASSSSSAENQNDEPKKSDDKNDDRNSGQDNVKNSSESKPETNNSAAEPQPNNENK GT:EXON 1|1-274:0| BL:SWS:NREP 1 BL:SWS:REP 42->157|SPAST_MOUSE|2e-04|31.4|105/614| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 170->199| TM:NTM 1 TM:REGION 5->22| SEG 189->230|eqiriqnqqaairrqreqqrqeearkaqqaaasssssaenqn| SEG 234->245|kksddknddrns| RP:PDB:NREP 1 RP:PDB:REP 49->108|2cg3A|4e-04|13.5|52/617| HM:PFM:NREP 2 HM:PFM:REP 5->55|PF09402|5.2e-05|17.6|51/332|MSC| HM:PFM:REP 113->148|PF10975|0.00036|34.3|35/70|DUF2802| RP:SCP:NREP 1 RP:SCP:REP 49->95|2ooeA1|6e-05|8.5|47/527|a.118.8.7| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------11-----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 101 STR:RPRED 36.9 SQ:SECSTR ##################################HHHHHHHHHHHTTTcHHHHHHHHHHHHHHcTTcHHHHHHH####HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH####HcccccccHHHHHHccHHHHHHHHHHHcc################################################################################################################################### DISOP:02AL 1-2,195-275| PSIPRED cHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc //