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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00339.1
DDBJ      :             Hypothetical exported protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  68/915 : Eukaryota  0/199 : Viruses  2/175   --->[See Alignment]
b.109.1
:884 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   158->487 2vyuA PDBj 2e-24 33.0 %
:BLT:PDB   473->545 1h8gB PDBj 9e-06 35.4 %
:BLT:PDB   561->705 2bibA PDBj 3e-11 31.0 %
:BLT:PDB   726->828 3ervA PDBj 8e-13 38.8 %
:RPS:PDB   170->457 1b9sA PDBj 5e-10 8.2 %
:RPS:PDB   572->691 1e88A PDBj 8e-07 19.0 %
:RPS:PDB   743->875 3b79A PDBj 2e-04 14.1 %
:RPS:SCOP  156->374 2bibA1  b.109.1.1 * 3e-30 30.2 %
:RPS:SCOP  446->687 2bibA1  b.109.1.1 * 3e-22 20.2 %
:HMM:SCOP  157->291 2bibA1 b.109.1.1 * 3.7e-24 43.1 %
:HMM:SCOP  295->441 2bibA1 b.109.1.1 * 3e-27 43.3 %
:HMM:SCOP  442->575 2bibA1 b.109.1.1 * 4.1e-24 46.8 %
:HMM:SCOP  577->724 2bibA1 b.109.1.1 * 2.1e-28 37.1 %
:HMM:PFM   199->211 PF01473 * CW_binding_1 0.00057 61.5 13/19  
:HMM:PFM   337->351 PF01473 * CW_binding_1 2.5e-06 60.0 15/19  
:HMM:PFM   447->459 PF01473 * CW_binding_1 0.00025 46.2 13/19  
:BLT:SWISS 1->46 SACB_STRMU 1e-04 45.7 %
:BLT:SWISS 152->708 TOXA_CLODI 2e-42 33.8 %
:PROS 838->848|PS00639|THIOL_PROTEASE_HIS
:TM
:REPEAT 12|155->176|195->220|221->240|262->287|309->334|350->374|396->421|443->488|450->468|510->535|615->640|658->683
:REPEAT 7|241->253|288->300|375->387|422->434|489->501|641->653|684->696
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00339.1 GT:GENE ABE00339.1 GT:PRODUCT Hypothetical exported protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1609082..1611736) GB:FROM 1609082 GB:TO 1611736 GB:DIRECTION - GB:PRODUCT Hypothetical exported protein GB:NOTE COG5263 [R] FOG: Glucan-binding domain (YG repeat) GB:PROTEIN_ID ABE00339.1 GB:DB_XREF GI:90821700 LENGTH 884 SQ:AASEQ MEKKVHYKMYKAGKKWVFVMLSTVALTGIMVMSGNIAKADAVAQSSTEQVAKIDTTSATTTSTQATAQVEKATNNVNESNAAQTSATTTTEQSSVNAGATSSSQNNKQATTTSVAASQNTSVANKDQVSSTQSSTTQNSEEPKVETPVNTADNASQKNVNGNWYLVDNNTGKNLTGFQEIKYQNKVVYYAPSNAQMQYGWQDINNNRYYFDTFDGAMTTGQKNINGNWYMFDAQGVLQTGFQRIESQNKTVYYSEDKDKLGQMQYGQKNIKGNWYNFDTYDGAMKTGFVTIPSQNKTVYYSEDKAKLGQMQYGKTKVNGKTYYFDTYDGAMKKGLTNINGNYYYFDNSGVMATNQKNINGNWYMFNDQGIMQTGFVHIPSQGKTVYYSKDKDKLGQMLYGQKNINGRWYNFDTYDGAMKTGFVYIPSQNKTVYYDENQSTLGQMKYGFQNINGKTYYLDTFDGSMKTGQKNINGNWYMFDDKGVMKVGFVTIPSQNKTVYYSEDKAKLGQMQYGKTGIKGKTYYFDTFDGAMKTGVFYNKETGTLQYYGNNGQMNYGNVVINGKVYAFDAAGNYLGKGNVTIDGHDYYLGNNNQVLVGFQKISNNTYYYNKDNGQKEYGQKNIDGSWYMFDDKTGIMKTGFVTIPSQNKTVYYGNNGQMQYGQRNIDGHWYMFDTYNGAMKTGLVYIPEQNKTVYYGSNGQMQYGVFRVGKITYTADHISGAIIGVYNDAEVIGQNPELPTGCEITAVTMMLRYAGANINKIQLANEMPRSNNGDYGFVGNPFSVTGWWVFPTGVAPVVNKHLGHSQVMTGASLESIKNKLLNGHLVVAWVANMNGFVNHAIALTGYNGNTLYYNNPWTARKESMSVSSFYTHWNADKQRALSY GT:EXON 1|1-884:0| BL:SWS:NREP 2 BL:SWS:REP 1->46|SACB_STRMU|1e-04|45.7|46/795| BL:SWS:REP 152->708|TOXA_CLODI|2e-42|33.8|527/2710| PROS 838->848|PS00639|THIOL_PROTEASE_HIS|PDOC00126| TM:NTM 1 TM:REGION 16->38| NREPEAT 2 REPEAT 12|155->176|195->220|221->240|262->287|309->334|350->374|396->421|443->488|450->468|510->535|615->640|658->683| REPEAT 7|241->253|288->300|375->387|422->434|489->501|641->653|684->696| SEG 55->68|ttsatttstqataq| SEG 77->94|nesnaaqtsatttteqss| SEG 127->139|qvsstqssttqns| SEG 546->558|qyygnngqmnygn| SEG 844->856|ltgyngntlyynn| BL:PDB:NREP 4 BL:PDB:REP 158->487|2vyuA|2e-24|33.0|276/300| BL:PDB:REP 473->545|1h8gB|9e-06|35.4|65/91| BL:PDB:REP 561->705|2bibA|3e-11|31.0|138/540| BL:PDB:REP 726->828|3ervA|8e-13|38.8|103/200| RP:PDB:NREP 3 RP:PDB:REP 170->457|1b9sA|5e-10|8.2|268/390| RP:PDB:REP 572->691|1e88A|8e-07|19.0|115/160| RP:PDB:REP 743->875|3b79A|2e-04|14.1|99/122| HM:PFM:NREP 3 HM:PFM:REP 199->211|PF01473|0.00057|61.5|13/19|CW_binding_1| HM:PFM:REP 337->351|PF01473|2.5e-06|60.0|15/19|CW_binding_1| HM:PFM:REP 447->459|PF01473|0.00025|46.2|13/19|CW_binding_1| RP:SCP:NREP 2 RP:SCP:REP 156->374|2bibA1|3e-30|30.2|202/232|b.109.1.1| RP:SCP:REP 446->687|2bibA1|3e-22|20.2|207/232|b.109.1.1| HM:SCP:REP 157->291|2bibA1|3.7e-24|43.1|123/0|b.109.1.1|1/4|Cell wall binding repeat| HM:SCP:REP 295->441|2bibA1|3e-27|43.3|134/0|b.109.1.1|2/4|Cell wall binding repeat| HM:SCP:REP 442->575|2bibA1|4.1e-24|46.8|124/0|b.109.1.1|3/4|Cell wall binding repeat| HM:SCP:REP 577->724|2bibA1|2.1e-28|37.1|140/0|b.109.1.1|4/4|Cell wall binding repeat| OP:NHOMO 282 OP:NHOMOORG 70 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------25-J----------------------------------------------------------------------------------------------------------------111111121122111------112------1111111----------------------1-1-1----1-1133--15-5412---------45597797887786-------------1------------1S-------L-N-3---564---2--22--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1---------------------------------------------------------------------------------------------------------------1----------------------------------------------- STR:NPRED 689 STR:RPRED 77.9 SQ:SECSTR ##################################################################################################################################################ccEEETTTEcccccccGGGccccEEEEEccccccTTcccccccccEEEEEETTccccTTTcEEEEEcccEEEEEcEEEcccEEEEEEEccGGGcEEEEEEEETTEEEEEEEcccccccEEcEEccccEccccEEETTEEEEEEEcccccccccEEEEEEEcTTEEEEEEccEEccccccccEEEccccccccccEEEEEETTTTEEEEEEcccccccccccccTTcccccTTcccccccccccccEEEEEccccEEEEEEEccccccHcEEEEEEEEEcTccccTTTccccccTTEEEEEEEEEEEEcccEccccTTccccccEEEccTcHHHHccEccccccTTccTTcHHHHcccTTccEEEEEEEEEEETTEEEETTcTTcccEEcccccccccccccEEccccccccTTcEEEcccccTTTEEccccTTcEEEEccccTTcccccccEEEEETTEEEEEcTTccccccEEEEcTTccEEEEcTTcccccEEEEcTccccEEEEcTTcccccEEEEETTEEEEEccccccccccEEEEcTTccEEEEcTTccccccccEEEc##############EcTTccccccTTTcTTcHHHHHHHHHHHHTTccccHHHHHTTccccTTcHHTEEEEEEEccGGGccGGGccEEEEEGGGEEEEEEEEETTHHHHHHHTTEEEEE##########################cTTTTccEEEEHHHHHHHEE######### DISOP:02AL 1-4,39-52,69-120,125-150,883-885| PSIPRED ccccEEEEEEEEccEEEEEEEHHHHHHHHHHHcccEEEEEEEEEcEEEEEcccccccEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEccEEEEccccccccccccccEEcccccccccEEEEEccEEEEEEccccccccEEEEEEEcccEEEEcccccEEEEEEEEEcccEEEEEccccEEEEEEEEEcccEEEEcccccEEEcEEEEEccccEEEEccccccccEEEEEEEEEcccEEEEEccccEEEEEEEEEEccccEEEEEccccccccEEEEEEEEccEEEEEcccccEEEEEEEEEccEEEEEcccEEEEEEEEEEccEEEEEcccccEEEEEEEEcccccEEEEEccccEEEEEEEEEEEEccEEEEEcccccEEEEEEEEEcccccEEEEccccccccEEEEEEEEEccEEEEEcccccEEEEccEEEccEEEEEcccccEEEEEEEccccEEEEEEEccccccEEEEEEEEEEccEEEEEEccccEEEEEEEEEccccEEEEEccccEEEcccEEEccEEEEEcccccEEEccEEEEccEEEEEcccccEEEEEEEcccEEEEEcccccEEEEEEEEEccEEEEEEcccccEEEEEEEEccccEEEEEcccccEEEEEEEEccEEEEEEccccEEEEEEEEEccccEEEEEcccccccccEEEEccEEEEEcccccEEEEEEEEEEEEEccccEEEEEEEEEccccEEEEEccccccEEEEEEEEEccccEEEcccccEEccEEEEccHHEEHHHEEccccEEcccccHHHHHHHHHccccEEEEEEEcccccEEEEEEEEccccEEEEEcccccccccccHHHHHHHHHHHHHHHccc //