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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00344.1
DDBJ      :             ABC transporter, ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  909/915 : Eukaryota  197/199 : Viruses  2/175   --->[See Alignment]
c.37.1
:246 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   5->245 2oukB PDBj 3e-78 60.8 %
:RPS:PDB   7->235 3b5jA PDBj 7e-56 27.8 %
:RPS:SCOP  6->246 1b0uA  c.37.1.12 * 9e-65 50.2 %
:HMM:SCOP  6->242 1xew.1 c.37.1.12 * 2.8e-76 41.5 %
:RPS:PFM   46->171 PF00005 * ABC_tran 3e-23 49.2 %
:HMM:PFM   46->171 PF00005 * ABC_tran 1.6e-29 41.0 117/118  
:HMM:PFM   9->54 PF03193 * DUF258 5e-06 22.2 45/161  
:BLT:SWISS 6->246 ARTM_BACSU 7e-76 58.3 %
:PROS 143->157|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00344.1 GT:GENE ABE00344.1 GT:PRODUCT ABC transporter, ATP-binding protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1616839..1617579) GB:FROM 1616839 GB:TO 1617579 GB:DIRECTION - GB:PRODUCT ABC transporter, ATP-binding protein GB:NOTE COG1126 [E] ABC-type polar amino acid transport system, ATPase component GB:PROTEIN_ID ABE00344.1 GB:DB_XREF GI:90821705 LENGTH 246 SQ:AASEQ MSNKKMIEVQNLQKKFGDNLVLKDISESVEQGQVICVIGPSGSGKSTFLRCLNVLERPTDGKVIFEGKDLTHISEKELDSLREKMGMVFQGFNLFPNMSVLENIKLAPMKVKNVDEVQAEKTAKELLAKVGLADKANQFPDSLSGGQKQRVAIARALAMDPEVMLFDEPTSALDPEMVGEVLKVMRDLADSGMTMVVVTHEMGFAKEVADQIWFMADGYVQEVGTPEEVFEHPTSERAKDFLAKIL GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 6->246|ARTM_BACSU|7e-76|58.3|240/240| PROS 143->157|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 5->245|2oukB|3e-78|60.8|240/241| RP:PDB:NREP 1 RP:PDB:REP 7->235|3b5jA|7e-56|27.8|227/243| RP:PFM:NREP 1 RP:PFM:REP 46->171|PF00005|3e-23|49.2|120/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 46->171|PF00005|1.6e-29|41.0|117/118|ABC_tran| HM:PFM:REP 9->54|PF03193|5e-06|22.2|45/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 6->246|1b0uA|9e-65|50.2|241/258|c.37.1.12| HM:SCP:REP 6->242|1xew.1|2.8e-76|41.5|229/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 60510 OP:NHOMOORG 1176 OP:PATTERN cdQEVRMOaYZVYVcRrLYVSVTd*RUosclbLDFEGFJHKIFZeUbqNU**oAWmXZdRWNMJd2BC Yg*V*kooyy*gkZdZdSR-RvDDf*SSSSSU*yy*****a*h****n*yqW***TcqFF***t******mljii*ljkU*ouEDFBDccYT7SINO-1JLZQRNmXgXYAAAAAAADEDDDDDLXUPWfRQYaeVx****ONN*f*sy*rqtjqXYYOVQTNpqiv***jPYMQPPPXMPNOrfjXU*sCdj*************************nv***t*********guvwtwsrtuuuutthoihj*sil**kUmhv**VW**ibYfttsqtvw***y****z*yyyu**zzzfggffgiijihef*vuomlutwux***********o*t****iqqn**o***t*YP***qejltVcrlzzRmijRicYYQPSONSjd***gay****************-***yt*z***ZF**************QPS**********ZYZZZZZZ*gkOWsf*66666666778AA9DEABEBBBAAA99B7MGIKFI************************z********ET****z*v*******hyyTePYvhNONMPNMZXVi*uk**Xmc*xdz*liyMjhdZagqahjijk**c*TPPWJRRRSQLEFFFGEEFEPYJJOTS***X*amQZS*XfijfUcjaaacachcfkh6-HNgUR331444****h************-************************xxrw*ruuwwwvwtvwvut**y*****f7************55NKGJGGHQSUSXQ*x*ghgegfQVXUQZSWoRTVUTKaKTY*o*************t***KIIGHJIHIRqxw*xyyyy*****aZZWUXWUVVKJKJB8SZZZQRSRBA8AB9A9*DhGFFEK-KIJFNKFXWTELSFMMBBCiu*edz***yFlS 4477ywS-qQBGdndNMSLSUZSfUiTMMHKGJVRRJSOPNONLJIPPUdaVofMNUIJKKLMFJBFD5DG9GGHEG3GJEGDDIK99-XlMMQUWIJHKFCMXSVAd***itj*qrTLNMRfS*zM*K**z4*b*RQRJsMR*gKXSOInJH*MibY*Qx*X*fmL*lu*yu*XMYRS*RTNSZ****J**Ya****h ------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------1--- DISOP:02AL 1-2| PSIPRED cccccEEEEEEEEEEEccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHHHHHccEEEEcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHcccHHHccccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHHHHHc //