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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00369.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  69/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:679 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  1->73 1f2t.1  c.37.1.12 * 6e-05 30.3 %
:HMM:SCOP  1->386 1f2t.1 c.37.1.12 * 2.4e-12 21.1 %
:HMM:PFM   2->49 PF02463 * SMC_N 3.7e-06 24.4 45/220  
:HMM:PFM   206->242 PF03245 * Phage_lysis 0.001 24.3 37/153  
:HMM:PFM   349->399 PF07735 * FBA_2 0.00058 23.5 51/71  
:BLT:SWISS 1->455 Y3535_METJA 5e-13 26.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00369.1 GT:GENE ABE00369.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1647690..1649729) GB:FROM 1647690 GB:TO 1649729 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG3593 [L] Predicted ATP-dependent endonuclease of the OLD family GB:PROTEIN_ID ABE00369.1 GB:DB_XREF GI:90821730 LENGTH 679 SQ:AASEQ MYLNEVKVKNYRSLKDVKLVLDKEKGTPNLSLIIGKNNSGKTSFLKIMKKMIAEDRKLSWDDFNIQYRREIHNILVSKEEGNEEDIEGIILDLYMEYDDNDDLNNILPLMLDLNMENNIVVLEFKCQPIIHKIEELRNLVNDTELKEYRKFSDFMQENLNKYFETNVYARGYDYESHELTDAIEKLDSSIVKKIINITGISAKRDTSNNEKDRTLSQIAAKYYENFSDEEDKIRSLREEVSKTDGILNKEYNKLFKDVIDDFRNFGNFPNGEEDVNIHSKMDVSKLLKGNTVFSYQYDKEDLPENYNGLGYMNLLGIIFEVKACFQKFRQDSNRSKINILYIEEPEAHTHPQLQYVFIKNIGKLIENEKDNLNVQTIITTHSSHIVSQCKFEDTNFFIKEKDNAQIKSYADLENLYKNEKEVFEFVKKYITLSRAEIFFADKLILIEGDTERILLPTMMERVDNNKNNGKDVPPLLSQNISVLVIGNHAHVLSKLISFLNLKTLVITDIDAKGIKGGKIKNPAEGKITTNGSLKKFFKGKSFKDLRNLGKDKKILSIEVKTEDRGKENVEYKEDPNGNLRIAYQIKEKNSKEESYQATSFEDSFIHLNLEFVQKLADEHGRNAGLKLVKKLKETKFTPYELSSNCIDSKTNFAIGILMYGNNRWQIPKYIEEGLEWIRK GT:EXON 1|1-679:0| BL:SWS:NREP 1 BL:SWS:REP 1->455|Y3535_METJA|5e-13|26.6|406/630| SEG 14->23|lkdvklvldk| SEG 79->93|eegneediegiildl| SEG 98->114|ddnddlnnilplmldln| SEG 419->428|ekevfefvkk| SEG 512->520|kgikggkik| SEG 531->543|gslkkffkgksfk| HM:PFM:NREP 3 HM:PFM:REP 2->49|PF02463|3.7e-06|24.4|45/220|SMC_N| HM:PFM:REP 206->242|PF03245|0.001|24.3|37/153|Phage_lysis| HM:PFM:REP 349->399|PF07735|0.00058|23.5|51/71|FBA_2| RP:SCP:NREP 1 RP:SCP:REP 1->73|1f2t.1|6e-05|30.3|66/288|c.37.1.12| HM:SCP:REP 1->386|1f2t.1|2.4e-12|21.1|204/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 79 OP:NHOMOORG 74 OP:PATTERN ----------------------------------------1---1----121---------------- ----1------------------------------------------------------------------------------------1-----------11--1--------------------------------------------------------------------------------------1----------1-------------11-------------1--------------------------------------1---------1-----------1--------------------11---1-1------111-----------------11--------------------------1-----------------1-------------------------1--11--1--1----------1-------------------1---------------------------------------------1---1------1---1--1--2---1--3----1---2----11------------------------------------------------------------------------------1--1---1--1---11-----1-1------1------1------------------1-----------------------1-------------------------------------------------1-----------------------------11--1------111-------------1-------------1--1--1-------1---1---------------------------------------------------------1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,639-639,643-643| PSIPRED ccEEEEEEEccccHHHHHHEEEcccccccEEEEEEcccccHHHHHHHHHHHHccccccccccccccccccccEEEEEcccccHHHHcEEEEEccccccccccHHHHHHHHHcccccccEEEEEEcccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccHHHHHcccEEEEEccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHccccccEEEEEEcccccEEEEccccccccccHHHHHHHHHHHcccccHHHHHccEEEEEcccHHHHHHHHHHHHHcccccccccHHHccccccEEEEEccHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccHHHHHHcccccccHHHcccccccccHHHHHHccccccEEEcccccccEEEEEEEEcccccHHHHccccHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHccccccEEEEEEEccccccccHHHHHHHHHHHHc //