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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00379.1
DDBJ      :             Hypothetical membrane associated protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:213 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   120->190 PF02517 * Abi 7e-04 35.2 %
:HMM:PFM   121->207 PF02517 * Abi 2e-18 31.0 87/99  
:HMM:PFM   22->101 PF12351 * Fig1 7.4e-06 21.5 79/182  
:BLT:SWISS 40->187 YXDF_LACLA 1e-06 30.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00379.1 GT:GENE ABE00379.1 GT:PRODUCT Hypothetical membrane associated protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1659206..1659847 GB:FROM 1659206 GB:TO 1659847 GB:DIRECTION + GB:PRODUCT Hypothetical membrane associated protein GB:NOTE COG1266 [R] Predicted metal-dependent membrane protease GB:PROTEIN_ID ABE00379.1 GB:DB_XREF GI:90821740 LENGTH 213 SQ:AASEQ MRNFLSLLGKIFLFIVFIVLSQLPLLLIESHYSMGIIAPLVILCYLILIGILFYIVKRIKGESPFKKITGKNVRFILAAYVVMILAKGILLTLMTKVYHQTTSANDKALNALVTDRTALLMTILVVVLVPITEELLYRGVFTSFFFKNQPFWQVAMSGVIFGLMHSSTNFISALVYVTMGWILAYVYVHTKNLSNSLNLHILNNAPFIAVLFN GT:EXON 1|1-213:0| BL:SWS:NREP 1 BL:SWS:REP 40->187|YXDF_LACLA|1e-06|30.4|135/177| TM:NTM 6 TM:REGION 5->27| TM:REGION 35->56| TM:REGION 73->95| TM:REGION 115->137| TM:REGION 145->167| TM:REGION 169->191| SEG 192->204|nlsnslnlhilnn| RP:PFM:NREP 1 RP:PFM:REP 120->190|PF02517|7e-04|35.2|71/97|Abi| HM:PFM:NREP 2 HM:PFM:REP 121->207|PF02517|2e-18|31.0|87/99|Abi| HM:PFM:REP 22->101|PF12351|7.4e-06|21.5|79/182|Fig1| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF02517|IPR003675| OP:NHOMO 52 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--12----1---23111111-11----11111111--1111111--1111111111111111---------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1| PSIPRED ccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEc //