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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00396.1
DDBJ      :             GTP-binding protein, probable translation factor
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  909/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.15.10
:366 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->366 1jalA PDBj e-104 55.2 %
:RPS:PDB   3->365 2dwqB PDBj e-101 47.6 %
:RPS:SCOP  6->274 1wxqA1  c.37.1.8 * 1e-45 22.9 %
:RPS:SCOP  282->366 1jalA2  d.15.10.2 * 8e-31 57.6 %
:HMM:SCOP  3->304 1wxqA1 c.37.1.8 * 6.5e-89 45.1 %
:HMM:SCOP  282->366 1jalA2 d.15.10.2 * 3.4e-35 68.2 %
:RPS:PFM   14->111 PF01926 * MMR_HSR1 2e-22 67.1 %
:RPS:PFM   89->250 PF01496 * V_ATPase_I 4e-04 28.8 %
:RPS:PFM   282->365 PF06071 * YchF-GTPase_C 1e-32 69.0 %
:HMM:PFM   282->365 PF06071 * YchF-GTPase_C 2.2e-42 75.0 84/84  
:HMM:PFM   14->122 PF01926 * MMR_HSR1 5.4e-27 45.8 83/108  
:HMM:PFM   100->176 PF02181 * FH2 0.00076 13.2 76/371  
:BLT:SWISS 1->366 ENGD_BACSU e-135 63.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00396.1 GT:GENE ABE00396.1 GT:PRODUCT GTP-binding protein, probable translation factor GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1674816..1675916) GB:FROM 1674816 GB:TO 1675916 GB:DIRECTION - GB:PRODUCT GTP-binding protein, probable translation factor GB:NOTE COG0012 [J] Predicted GTPase, probable translation factor GB:PROTEIN_ID ABE00396.1 GB:DB_XREF GI:90821757 LENGTH 366 SQ:AASEQ MALTAGIVGLPNVGKSTLFNAITKAGAEMANYPFATIDPNVGMVEVPDSRLARIDEIIPAKKIVHTTFEFTDIAGIVKGASKGEGLGNKFLENIRQVDAIVHVVRAFDDDNITHVANKVDPLEDIDTINMELTLADLESVNKRYARVEKVARTKDKDAVAEFAVLQKIKPVLEEGKPVRSIEFNDEEKKIVKGLFLLTSKPVLYVANIAEEDMADPEQSKYYQQVKKFAEDEGSQALAVSARTEEEIAELPDDEKQEFLEAEGVEESGLDRLIRVSYKLLGLATFFTAGGKETRAWTFKRGMKAPQVAGVIHSDFERGFIRAETVSFDDLDKYGSMQAVKEAGRLRLEGKEYEVQDGDIIEFRFNV GT:EXON 1|1-366:0| BL:SWS:NREP 1 BL:SWS:REP 1->366|ENGD_BACSU|e-135|63.7|366/366| BL:PDB:NREP 1 BL:PDB:REP 1->366|1jalA|e-104|55.2|348/348| RP:PDB:NREP 1 RP:PDB:REP 3->365|2dwqB|e-101|47.6|336/337| RP:PFM:NREP 3 RP:PFM:REP 14->111|PF01926|2e-22|67.1|82/105|MMR_HSR1| RP:PFM:REP 89->250|PF01496|4e-04|28.8|156/631|V_ATPase_I| RP:PFM:REP 282->365|PF06071|1e-32|69.0|84/84|YchF-GTPase_C| HM:PFM:NREP 3 HM:PFM:REP 282->365|PF06071|2.2e-42|75.0|84/84|YchF-GTPase_C| HM:PFM:REP 14->122|PF01926|5.4e-27|45.8|83/108|MMR_HSR1| HM:PFM:REP 100->176|PF02181|0.00076|13.2|76/371|FH2| GO:PFM:NREP 5 GO:PFM GO:0005525|"GO:GTP binding"|PF01926|IPR002917| GO:PFM GO:0005622|"GO:intracellular"|PF01926|IPR002917| GO:PFM GO:0015078|"GO:hydrogen ion transmembrane transporter activity"|PF01496|IPR002490| GO:PFM GO:0015986|"GO:ATP synthesis coupled proton transport"|PF01496|IPR002490| GO:PFM GO:0033177|"GO:proton-transporting two-sector ATPase complex, proton-transporting domain"|PF01496|IPR002490| RP:SCP:NREP 2 RP:SCP:REP 6->274|1wxqA1|1e-45|22.9|240/273|c.37.1.8| RP:SCP:REP 282->366|1jalA2|8e-31|57.6|85/85|d.15.10.2| HM:SCP:REP 3->304|1wxqA1|6.5e-89|45.1|297/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 282->366|1jalA2|3.4e-35|68.2|85/0|d.15.10.2|1/1|TGS-like|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j6664465873446575445 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 366 STR:RPRED 100.0 SQ:SECSTR HHccEEEEccccccHHHHHHHHHHHHTccccEEEEEcccHHHHHHHHHTccTTccccEEcTTccccEEEEEETTTTcccccccccTTcHHHHHHHHccEEEEcEEccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGHHHHHHHHHHHHHHHTTccGGGccccccTTHHHHHcccGGGccEEccEEccTTTTTTTTTcHHHHHHHHHHHHHTccccEEcHHHHHHTTTcTHHHHHHHHHHTTccccHHHHHHHHHHHHTTEEEEEEcccccEEEEEEETTccHHHHHHTTcTHHHHHEEEEEEEEHHHHHHHccHHHHHHHTccEEEcccccccTTEEEEEEEcc PSIPRED cccEEEEEEcccccHHHHHHHHHccccccccccccccccEEEEEEEccccEEEEEcccccccccccEEEEEEcccEEccccccccHHHHHHHHHHHccEEEEEEcccccccHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccEEccccccHHHHHHHHHHHHHHHccEEEEEcccHHHHccccccHHHHHHHHHHHHccccEEEEEHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHcccEEEEEccccccccEEccccccHHHHHHHHHHHHHHccEEEEEEEHHHHHHcccHHHHHHcccEEEcccEEEEccccEEEEEccc //