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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00424.1
DDBJ      :             Transcriptional regulator, Cro/CI family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:136 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->65 2ewtA PDBj 2e-04 39.6 %
:RPS:PDB   2->79 3d1nP PDBj 1e-07 15.5 %
:RPS:SCOP  4->119 1s4kA  a.35.1.6 * 5e-08 11.1 %
:HMM:SCOP  1->82 1adrA_ a.35.1.2 * 2e-07 30.6 %
:HMM:PFM   6->70 PF01381 * HTH_3 4.1e-09 32.7 55/55  
:HMM:PFM   74->123 PF10043 * DUF2279 0.00036 26.1 46/85  
:BLT:SWISS 1->83 YONR_BACSU 2e-04 31.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00424.1 GT:GENE ABE00424.1 GT:PRODUCT Transcriptional regulator, Cro/CI family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1707202..1707612) GB:FROM 1707202 GB:TO 1707612 GB:DIRECTION - GB:PRODUCT Transcriptional regulator, Cro/CI family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABE00424.1 GB:DB_XREF GI:90821785 LENGTH 136 SQ:AASEQ MFPEKLRALRTGRGLSLAGLAKEMNEMEKGKQEKKNTGPQIGSWERGVNTPSYLEIIKLCRFFGVTPNFLIGDMRGKIDLNELFASNARMKFEGRTLTSADRTEIYGLIKAHIRGKYAEVSDLNDDDTDDLVLPLD GT:EXON 1|1-136:0| BL:SWS:NREP 1 BL:SWS:REP 1->83|YONR_BACSU|2e-04|31.5|73/108| SEG 122->135|dlndddtddlvlpl| BL:PDB:NREP 1 BL:PDB:REP 5->65|2ewtA|2e-04|39.6|53/71| RP:PDB:NREP 1 RP:PDB:REP 2->79|3d1nP|1e-07|15.5|71/79| HM:PFM:NREP 2 HM:PFM:REP 6->70|PF01381|4.1e-09|32.7|55/55|HTH_3| HM:PFM:REP 74->123|PF10043|0.00036|26.1|46/85|DUF2279| RP:SCP:NREP 1 RP:SCP:REP 4->119|1s4kA|5e-08|11.1|108/120|a.35.1.6| HM:SCP:REP 1->82|1adrA_|2e-07|30.6|72/0|a.35.1.2|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 9 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---1111---11--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 83 STR:RPRED 61.0 SQ:SECSTR cHHHHHHHHHHHTTccHHHHHHHHTccHHHHHcGGGcHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHTccTHHHH##################################################### PSIPRED ccHHHHHHHHHHccccHHHHHHHHcHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccc //