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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00433.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  95/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.54.1
:122 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->122 3ct6B PDBj 6e-36 51.6 %
:RPS:PDB   4->117 3b48B PDBj 2e-28 30.1 %
:RPS:SCOP  5->117 3b48A1  c.54.1.2 * 1e-21 32.1 %
:HMM:SCOP  2->108 1pdoA_ c.54.1.1 * 0.00048 26.4 %
:HMM:PFM   4->112 PF03610 * EIIA-man 3.2e-27 34.3 108/116  
:BLT:SWISS 1->122 DHAM_LACLA 2e-35 51.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00433.1 GT:GENE ABE00433.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1718669..1719037) GB:FROM 1718669 GB:TO 1719037 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG0718 [S] Uncharacterized protein conserved in bacteria GB:PROTEIN_ID ABE00433.1 GB:DB_XREF GI:90821794 LENGTH 122 SQ:AASEQ MSLGITIVSHVYEVANGLPRLLTQVAKDVPITTAGGTEDNDVGTSMEKIMNAFEENDADEILAFYDLGSAKMNLEMAIEMTDKKVHLYDVALIEGAYTAATLLEAGVDLQEVEKQLEPLKIK GT:EXON 1|1-122:0| BL:SWS:NREP 1 BL:SWS:REP 1->122|DHAM_LACLA|2e-35|51.6|122/123| BL:PDB:NREP 1 BL:PDB:REP 1->122|3ct6B|6e-36|51.6|122/128| RP:PDB:NREP 1 RP:PDB:REP 4->117|3b48B|2e-28|30.1|113/126| HM:PFM:NREP 1 HM:PFM:REP 4->112|PF03610|3.2e-27|34.3|108/116|EIIA-man| RP:SCP:NREP 1 RP:SCP:REP 5->117|3b48A1|1e-21|32.1|112/129|c.54.1.2| HM:SCP:REP 2->108|1pdoA_|0.00048|26.4|106/129|c.54.1.1|1/1|IIA domain of mannose transporter, IIA-Man| OP:NHOMO 96 OP:NHOMOORG 95 OP:PATTERN -------------------------------------------------------------------- -----1------1---------------------------------------111----------11---------------1-----------------------------------------------------1------------------------------------------------1-----------------------11-------1---111111112---111111111111111111--1--11-----11--11-11---1111111--1---1---11-11---1--1---1--1-111---1111----1-------1-1--111----1-1----1-----------1--------------------11--------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------1-1-------1-----------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------1--------1-------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEcccHHHHHHHHHHHHTccTTcEEEEccccTTccccccHHHHHHHHHccTTcEEEEEEccTHHHHHHHHHHTccHTTEEEccccHHHHHHHHHHHHTTcccHHHHHHHHHTcccc DISOP:02AL 122-123| PSIPRED cEEEEEEEEcHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccHHHHHHHHHHcccc //