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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00437.1
DDBJ      :             Hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:174 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->97 2iu5B PDBj 7e-14 32.3 %
:RPS:PDB   1->81 3b6aA PDBj 1e-08 19.8 %
:RPS:SCOP  8->65 1vi0A1  a.4.1.9 * 8e-07 22.4 %
:HMM:SCOP  2->73 1zk8A1 a.4.1.9 * 1.4e-07 22.2 %
:HMM:PFM   14->53 PF00440 * TetR_N 2.4e-07 22.5 40/47  
:BLT:SWISS 2->97 DHAS_LACLA 2e-13 32.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00437.1 GT:GENE ABE00437.1 GT:PRODUCT Hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1721748..1722272) GB:FROM 1721748 GB:TO 1722272 GB:DIRECTION - GB:PRODUCT Hypothetical protein GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABE00437.1 GB:DB_XREF GI:90821798 LENGTH 174 SQ:AASEQ MSYILQKKIANTFREQIMKKGFNHVSVSSLMRILDIRRQTFYDSFQDKYDLLEWQLNDTLEETIDNNIDYLHWKEILKLFIYEIDAHKRYYYECLTVQTEVNVADIFATHLVVLLAHVLERQELISNKKAQDNMWILCLGISTTIIHNVTTPNPVDYELIVKQAINAIEYSFES GT:EXON 1|1-174:0| BL:SWS:NREP 1 BL:SWS:REP 2->97|DHAS_LACLA|2e-13|32.3|96/187| SEG 110->119|hlvvllahvl| BL:PDB:NREP 1 BL:PDB:REP 2->97|2iu5B|7e-14|32.3|96/177| RP:PDB:NREP 1 RP:PDB:REP 1->81|3b6aA|1e-08|19.8|81/213| HM:PFM:NREP 1 HM:PFM:REP 14->53|PF00440|2.4e-07|22.5|40/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 8->65|1vi0A1|8e-07|22.4|58/72|a.4.1.9| HM:SCP:REP 2->73|1zk8A1|1.4e-07|22.2|72/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 32 OP:NHOMOORG 32 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-11-111-1----111----------------------------------------------11----11----1--111---1-1------1------1--1---1--1---1---1111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 170 STR:RPRED 97.7 SQ:SECSTR cccccTTHHHHHHHHHHHHHcGGGccHHHHHHHTTccHHHHHHHHccHHHHHHHHHHHHGGGcccccccTTcHHHHHHHHHHHHTHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHTTcTTcccGGGHHHHHHHHTTTcc#### DISOP:02AL 1-2,174-175| PSIPRED ccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHEEEEccccccHHHHHHHHHHHHHHHHcc //