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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00445.1
DDBJ      :             Nucleoside deoxyribosyltransferase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.14
:155 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->144 1s2lC PDBj 1e-17 38.0 %
:RPS:PDB   3->143 3ehdA PDBj 3e-27 24.1 %
:RPS:SCOP  1->147 1s2dA  c.23.14.1 * 2e-34 37.9 %
:HMM:SCOP  1->155 1f8yA_ c.23.14.1 * 1.3e-43 46.5 %
:RPS:PFM   4->119 PF05014 * Nuc_deoxyrib_tr 1e-10 37.7 %
:HMM:PFM   4->118 PF05014 * Nuc_deoxyrib_tr 5.7e-31 40.6 106/113  
:BLT:SWISS 3->146 NTD_LACFE 2e-19 39.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00445.1 GT:GENE ABE00445.1 GT:PRODUCT Nucleoside deoxyribosyltransferase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1731785..1732252 GB:FROM 1731785 GB:TO 1732252 GB:DIRECTION + GB:PRODUCT Nucleoside deoxyribosyltransferase GB:NOTE COG3613 [F] Nucleoside 2-deoxyribosyltransferase GB:PROTEIN_ID ABE00445.1 GB:DB_XREF GI:90821806 LENGTH 155 SQ:AASEQ MAKIYLAAPFFSDGQHDRINQVKEALEANKTVSSIFVPEEHSYEHAEFGSLEWQKATFTLDINNIYTADAVVAIIDYKKEESDNEADSGTAFEIGLAFGTNTPVIVVQFDAEKELNLMISQALTAYFDASKGELSDLANYDFNELMPKLANRPVI GT:EXON 1|1-155:0| BL:SWS:NREP 1 BL:SWS:REP 3->146|NTD_LACFE|2e-19|39.0|136/168| BL:PDB:NREP 1 BL:PDB:REP 3->144|1s2lC|1e-17|38.0|129/153| RP:PDB:NREP 1 RP:PDB:REP 3->143|3ehdA|3e-27|24.1|133/156| RP:PFM:NREP 1 RP:PFM:REP 4->119|PF05014|1e-10|37.7|106/119|Nuc_deoxyrib_tr| HM:PFM:NREP 1 HM:PFM:REP 4->118|PF05014|5.7e-31|40.6|106/113|Nuc_deoxyrib_tr| GO:PFM:NREP 2 GO:PFM GO:0005634|"GO:nucleus"|PF05014|IPR007710| GO:PFM GO:0070694|"GO:deoxyribonucleoside 5'-monophosphate N-glycosidase activity"|PF05014|IPR007710| RP:SCP:NREP 1 RP:SCP:REP 1->147|1s2dA|2e-34|37.9|140/165|c.23.14.1| HM:SCP:REP 1->155|1f8yA_|1.3e-43|46.5|144/0|c.23.14.1|1/1|N-(deoxy)ribosyltransferase-like| OP:NHOMO 32 OP:NHOMOORG 25 OP:PATTERN -----------------------------------------------1-------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------1211112-1-2211112111221-1----------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 142 STR:RPRED 91.6 SQ:SECSTR ##EEEEEcccccHHHHHHHHHHHHHHHTTcTTEEEEcGGGGcccccTTTTccccHHHHHHHHHHHHTccEEEEEcccHHHHcTccccHHHHHHHHHHHHTTccEEEEcccGGGcTcHHHHHHTTcTTccccccHHHHHHHHTTT########### DISOP:02AL 155-156| PSIPRED cccEEEEcccccHHHHHHHHHHHHHHHHcccccEEEccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEEcccccccccccccHHHHHHHHHHccccEEEEEccccccEEEEEEcccHHcccccHHHHHHHHHcccccccccccccccc //