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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00481.1
DDBJ      :             Hypothetical protein with PPE repeats
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.113.1a.8.1
:632 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->263 2dgjB PDBj 1e-04 27.6 %
:RPS:PDB   11->176 1ciiA PDBj 8e-04 24.4 %
:RPS:SCOP  144->189 1ewrA1  a.113.1.1 * 7e-04 21.7 %
:HMM:SCOP  64->130 1xvhA1 a.8.1.2 * 9.6e-08 26.9 %
:RPS:PFM   101->243 PF05667 * DUF812 4e-04 24.8 %
:HMM:PFM   73->119 PF07554 * FIVAR 3.5e-06 31.9 47/51  
:BLT:SWISS 13->68 FM3_BORPE 3e-04 37.5 %
:BLT:SWISS 51->252 EBH_STAAW 3e-09 28.7 %
:COIL
:REPEAT 2|12->61|84->133
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00481.1 GT:GENE ABE00481.1 GT:PRODUCT Hypothetical protein with PPE repeats GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1761082..1762980 GB:FROM 1761082 GB:TO 1762980 GB:DIRECTION + GB:PRODUCT Hypothetical protein with PPE repeats GB:NOTE COG5651 [N] PPE-repeat proteins GB:PROTEIN_ID ABE00481.1 GB:DB_XREF GI:90821842 LENGTH 632 SQ:AASEQ MANSNIVSLPIYYNASENNRLAFDALMSKAKSLQYKLSLTNEEMVAMIDKLTAAKNNLNGKATDFSKADELLEEYNNRDNNQRYHNATAPSQLAYDNAINELKKLQNTTQVTQATVDSAIANVIEAKNQLDGKVLSTEEQNKFDAIKSFKEDIAYYQEAIKYLPDAYRTAAEGLLQTQGLNVLPNINAFSTESIVSMQNNLKTWLDFYIKSADKQLQGKRDLEAKIQELQNLVDTKLSLYTELNRATDFINASKEMLQDPSKAYLYEEQSTKLTTVINEAIDAQNKADKLIADKEKERAAALEELLKLQVPGKDSYIKFTDENYKITASLDDIVERTKLVAKILPYLGDVYAGNPIDPEYLKYKTVDEYLQVGTPAYDKMVTTINRLKEDILKEFALGRGTKDSMGSNIDKRIKTVVTDEDVINLKPLIDLADTYSKRALENINRMRFAIGVPPMKMAPISDKRKAMMIVHALAGYQAGQNPDFKIGDSHVGTIAVLLVPHAMTAGYSENVYPSANAPIISNHFTPEYMADVYNKLELMEGIKYFSDYFNDTEAKSGHYTNIILPQHQYFYSAMIVGNVVPENNSFLSYRVSLTELFYELADDQYKWWLKHFDEWPKVNPETDLDRTDFNNL GT:EXON 1|1-632:0| BL:SWS:NREP 2 BL:SWS:REP 13->68|FM3_BORPE|3e-04|37.5|56/204| BL:SWS:REP 51->252|EBH_STAAW|3e-09|28.7|195/9904| COIL:NAA 87 COIL:NSEG 4 COIL:REGION 36->43| COIL:REGION 53->55| COIL:REGION 205->236| COIL:REGION 266->309| NREPEAT 1 REPEAT 2|12->61|84->133| SEG 292->308|adkekeraaaleellkl| BL:PDB:NREP 1 BL:PDB:REP 72->263|2dgjB|1e-04|27.6|163/241| RP:PDB:NREP 1 RP:PDB:REP 11->176|1ciiA|8e-04|24.4|156/602| RP:PFM:NREP 1 RP:PFM:REP 101->243|PF05667|4e-04|24.8|141/491|DUF812| HM:PFM:NREP 1 HM:PFM:REP 73->119|PF07554|3.5e-06|31.9|47/51|FIVAR| RP:SCP:NREP 1 RP:SCP:REP 144->189|1ewrA1|7e-04|21.7|46/98|a.113.1.1| HM:SCP:REP 64->130|1xvhA1|9.6e-08|26.9|67/0|a.8.1.2|2/3|Bacterial immunoglobulin/albumin-binding domains| OP:NHOMO 6 OP:NHOMOORG 6 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1-------1-------111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 37.0 SQ:SECSTR ##########EEEEEEEccHHHHHHHHTcc#HHHHHHHTcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTHHHHHHHHHHHHHH#HHHHHHHHHHHHHHH########HcTTHHHHHTcHHHHTcc########HHHHHHHHHHHHHHHHH#HcTTTcccccHH################################################################################################################################################################################################################################################################################################################################################################################# DISOP:02AL 1-3,626-627,631-633| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccEEEccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccEEEEEEEcHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccc //