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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABE00490.1
DDBJ      :             Transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  140/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:197 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->101 2eh3A PDBj 8e-11 30.8 %
:RPS:PDB   9->184 1a6iA PDBj 3e-19 16.3 %
:RPS:SCOP  6->75 1ui5A1  a.4.1.9 * 3e-14 31.4 %
:HMM:SCOP  4->76 2fd5A1 a.4.1.9 * 6.9e-15 35.6 %
:RPS:PFM   18->61 PF00440 * TetR_N 5e-06 40.9 %
:HMM:PFM   20->60 PF00440 * TetR_N 2e-15 36.6 41/47  
:BLT:SWISS 3->82 YXBF_BACSU 3e-10 39.5 %
:BLT:SWISS 118->161 ST1E1_BOVIN 6e-04 34.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00490.1 GT:GENE ABE00490.1 GT:PRODUCT Transcriptional regulator, TetR family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1769289..1769882) GB:FROM 1769289 GB:TO 1769882 GB:DIRECTION - GB:PRODUCT Transcriptional regulator, TetR family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABE00490.1 GB:DB_XREF GI:90821851 LENGTH 197 SQ:AASEQ MHQNDLRVRKTRAKIKRALIETINEKGFGNLTVSDITERAGINRGTFYIHYKGKQDLLEQLEEAIYSDIIQLFHDNGTISSATSYEDLNRQFFQKFSAYIYGERYFILAIVLGNGDPMFYHKIKQILTRELLKRMEYLGIKMSDEIPHEYIEEYAIGSMLNLSIYWLEKDNPEPPNEFAKIMMRTRTKAPLAFAVKE GT:EXON 1|1-197:0| BL:SWS:NREP 2 BL:SWS:REP 3->82|YXBF_BACSU|3e-10|39.5|76/380| BL:SWS:REP 118->161|ST1E1_BOVIN|6e-04|34.1|44/295| BL:PDB:NREP 1 BL:PDB:REP 11->101|2eh3A|8e-11|30.8|91/170| RP:PDB:NREP 1 RP:PDB:REP 9->184|1a6iA|3e-19|16.3|172/193| RP:PFM:NREP 1 RP:PFM:REP 18->61|PF00440|5e-06|40.9|44/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 20->60|PF00440|2e-15|36.6|41/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 6->75|1ui5A1|3e-14|31.4|70/71|a.4.1.9| HM:SCP:REP 4->76|2fd5A1|6.9e-15|35.6|73/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 254 OP:NHOMOORG 141 OP:PATTERN ---------------------------------------------1---------------------- -2--1-------1-----------------------------------------------------1-------------24-1------------------------------------------------------------1----------------------------------------------2--33333232233232311223-232---361111111-2711112111111111141-431-1----4--122112313114-22223212225331111111111111221111111114111111112---48----------1-22-1112---1-1----21----------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 185 STR:RPRED 93.9 SQ:SECSTR ####cccccccHHHHHHHHHHHHHHHTTTcccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHccccccTTccccccHHHHHHHHHHHHHHHHHHccTTHHHHHHHccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHTcccHHHHHHHHHHHHcc######## DISOP:02AL 1-11,195-195,197-198| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcc //