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Lactobacillus salivarius UCC118 (lsal0)
Gene : alr
DDBJ      :alr          Alanine racemase
Swiss-Prot:ALR_LACS1    RecName: Full=Alanine racemase;         EC=5.1.1.1;

Homologs  Archaea  5/68 : Bacteria  831/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
b.49.2c.1.6
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->370 3e5pB PDBj e-110 51.8 %
:RPS:PDB   6->370 1bd0B PDBj 3e-76 47.7 %
:RPS:SCOP  13->246 1bd0A2  c.1.6.1 * 2e-43 40.5 %
:RPS:SCOP  241->370 1bd0A1  b.49.2.2 * 4e-55 56.2 %
:HMM:SCOP  13->247 1rcqA2 c.1.6.1 * 2.1e-64 40.4 %
:HMM:SCOP  228->370 1bd0A1 b.49.2.2 * 4.7e-57 46.7 %
:RPS:PFM   13->196 PF01168 * Ala_racemase_N 1e-14 33.5 %
:RPS:PFM   247->370 PF00842 * Ala_racemase_C 2e-25 47.5 %
:HMM:PFM   13->232 PF01168 * Ala_racemase_N 1.2e-58 38.5 208/214  
:HMM:PFM   246->370 PF00842 * Ala_racemase_C 3.6e-47 48.4 124/129  
:BLT:SWISS 1->371 ALR_LACS1 0.0 100.0 %
:PROS 37->47|PS00395|ALANINE_RACEMASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99171.1 GT:GENE alr GT:PRODUCT Alanine racemase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 391397..392512 GB:FROM 391397 GB:TO 392512 GB:DIRECTION + GB:GENE alr GB:PRODUCT Alanine racemase GB:NOTE COG0787 [M] Alanine racemase GB:PROTEIN_ID ABD99171.1 GB:DB_XREF GI:90820532 GB:GENE:GENE alr LENGTH 371 SQ:AASEQ MVIGRHRNTRAIISLEAIKHNVATQISKLKDGQSLFAVVKANAYGHGMIPVAKAAKEAGANGFCVAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQRLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKHSDQLKCEGVFTHFSTADSKDPAYFEKQSQKFDELVGVLKKKPKYIHQANSATALWHPNFEGNLVRMGISMYGLNPSGDMIDETWNLEPALSLESELVAVKEVEAGSSIGYGATYTSSQSEWIGTVPIGYADGWLRRMQGFKVLIDGQYCEIVGRVCMDQFMVRLPKKYDLGTKVTLIGENNGKVITAQDVANYADTIHYEIMCNITERVPRIYK GT:EXON 1|1-371:0| SW:ID ALR_LACS1 SW:DE RecName: Full=Alanine racemase; EC=5.1.1.1; SW:GN Name=alr; OrderedLocusNames=LSL_0358; SW:KW Cell shape; Cell wall biogenesis/degradation; Complete proteome;Isomerase; Peptidoglycan synthesis; Pyridoxal phosphate. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->371|ALR_LACS1|0.0|100.0|371/371| GO:SWS:NREP 4 GO:SWS GO:0008360|"GO:regulation of cell shape"|Cell shape| GO:SWS GO:0007047|"GO:cellular cell wall organization"|Cell wall biogenesis/degradation| GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0009252|"GO:peptidoglycan biosynthetic process"|Peptidoglycan synthesis| PROS 37->47|PS00395|ALANINE_RACEMASE|PDOC00332| BL:PDB:NREP 1 BL:PDB:REP 1->370|3e5pB|e-110|51.8|369/371| RP:PDB:NREP 1 RP:PDB:REP 6->370|1bd0B|3e-76|47.7|363/380| RP:PFM:NREP 2 RP:PFM:REP 13->196|PF01168|1e-14|33.5|170/211|Ala_racemase_N| RP:PFM:REP 247->370|PF00842|2e-25|47.5|122/127|Ala_racemase_C| HM:PFM:NREP 2 HM:PFM:REP 13->232|PF01168|1.2e-58|38.5|208/214|Ala_racemase_N| HM:PFM:REP 246->370|PF00842|3.6e-47|48.4|124/129|Ala_racemase_C| GO:PFM:NREP 2 GO:PFM GO:0006522|"GO:alanine metabolic process"|PF00842|IPR011079| GO:PFM GO:0008784|"GO:alanine racemase activity"|PF00842|IPR011079| RP:SCP:NREP 2 RP:SCP:REP 13->246|1bd0A2|2e-43|40.5|232/233|c.1.6.1| RP:SCP:REP 241->370|1bd0A1|4e-55|56.2|130/148|b.49.2.2| HM:SCP:REP 13->247|1rcqA2|2.1e-64|40.4|225/0|c.1.6.1|1/1|PLP-binding barrel| HM:SCP:REP 228->370|1bd0A1|4.7e-57|46.7|135/149|b.49.2.2|1/1|Alanine racemase C-terminal domain-like| OP:NHOMO 1102 OP:NHOMOORG 843 OP:PATTERN --------------------------------------11111------------------------- 1111111111111111111-1111111111111111111111111111122221211211112111111111111111111111111111111111---11111111111--------------11111111111111111---111111111111111111111111111111111111111111111111122222222222222221122222231111222111111322222222222222222222211111111111111111111232111111111111111111111111111111111111111111111111112233322331211211122211111111212211121112112112211-1111111112-1111111112111111111111-11111112231122232222221121121111111111111111111-2231111------------1111111111111-----113111222122222321111221122221223212111111111111111111111111121111111111111111111111112111111111111111111111111111111111211111111111111332111111121111111211111111111--11111------22111212222222222-22222222222222222232221122322332232222323322111222211222122212222--1111111111111111111111111111111222321211111222211112222111112111121111122322222131221111111111111111111111111111111111--------------------------11111-----112 -------------------------------------------------------------------------------------------------------------1-----------------------------------------------------31-------------------1-------111---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 371 STR:RPRED 100.0 SQ:SECSTR ccccTccccEEEEEHHHHHHHHHHHHHHccTTcEEEEEcHHHHHHTcHHHHHHHHHHHTccEEEEccHHHHHHHHHTTccccEEEcccccGGGHHHHHHTTEEEEEccHHHHHHHHHHcccccccEEEEEEccccccccccccHHHHHHHHHHHHHccTTEEEEEEEcccccTTccccHHHHHHHHHHHHHHTTccccccEEEEEcHHHHHHcGGGcTTEEEEcGGGGTccccGGGGGGcccccccEEEEEEccEEEEEcTTcEEcGGGcEEccccEEEEEEcccGGGTccGGGTTcEEEETTEEEEEEcccccccEEEEccccccTTcEEEEEEEETTEEEcHHHHHHHHTccTTHHHHHccTTccEEET DISOP:02AL 1-4,371-372| PSIPRED ccccccccEEEEEEHHHHHHHHHHHHHHcccccEEEEEEEEccccccHHHHHHHHHHccccEEEEEEHHHHHHHHHccccccEEEEccccHHHHHHHHHcccEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccEEEEEHHHHHHccccccccEEEEEEEEEccccccccccccccccEEEEEEEEEEEEEEEccccEEEcccEEEccccEEEEEEEccHHccccccccccEEEEccEEEEEEEEccccEEEEEcccccccccEEEEEcccccccccHHHHHHHHcccHHHHHccccccccEEEc //