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Lactobacillus salivarius UCC118 (lsal0)
Gene : argS
DDBJ      :argS         Arginyl-tRNA synthetase
Swiss-Prot:SYR_LACS1    RecName: Full=Arginyl-tRNA synthetase;         EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase;         Short=ArgRS;

Homologs  Archaea  68/68 : Bacteria  852/915 : Eukaryota  192/199 : Viruses  1/175   --->[See Alignment]
a.27.1c.26.1d.67.2
:563 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->563 1f7uA PDBj e-101 37.8 %
:RPS:PDB   2->563 1bs2A PDBj 2e-54 32.6 %
:RPS:SCOP  3->82 1iq0A3  d.67.2.1 * 1e-17 32.1 %
:RPS:SCOP  108->444 1bs2A2  c.26.1.1 * 3e-80 40.5 %
:RPS:SCOP  444->563 1iq0A1  a.27.1.1 * 6e-33 44.1 %
:HMM:SCOP  1->105 1bs2A3 d.67.2.1 * 2.3e-30 43.3 %
:HMM:SCOP  106->444 1bs2A2 c.26.1.1 * 3.7e-94 42.1 %
:HMM:SCOP  444->563 1iq0A1 a.27.1.1 * 4.3e-34 44.1 %
:RPS:PFM   22->84 PF03485 * Arg_tRNA_synt_N 5e-08 47.6 %
:RPS:PFM   94->407 PF00750 * tRNA-synt_1d 9e-64 44.2 %
:RPS:PFM   450->563 PF05746 * DALR_1 1e-21 43.9 %
:HMM:PFM   94->436 PF00750 * tRNA-synt_1d 9e-81 37.6 338/354  
:HMM:PFM   450->563 PF05746 * DALR_1 2.5e-34 43.9 114/119  
:HMM:PFM   7->84 PF03485 * Arg_tRNA_synt_N 2.2e-20 45.9 74/83  
:BLT:SWISS 1->563 SYR_LACS1 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99487.1 GT:GENE argS GT:PRODUCT Arginyl-tRNA synthetase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 725008..726699 GB:FROM 725008 GB:TO 726699 GB:DIRECTION + GB:GENE argS GB:PRODUCT Arginyl-tRNA synthetase GB:NOTE COG0018 [J] Arginyl-tRNA synthetase GB:PROTEIN_ID ABD99487.1 GB:DB_XREF GI:90820848 GB:GENE:GENE argS LENGTH 563 SQ:AASEQ MDYKVKVAQVIEQAVDGKLSQEDILAKIEKPKTLNLGDYAFPAFVLSKVLRKAPQMIASELVEKIDQTGFEKVEAVGPYVNFFLDKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLALLLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNNPELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFTEVYDRLNITFDSYNGEAFYNDKMDEITDLLQEKGLLKESQGAEIVDLEKYDLNPALIRKTDGATLYITRDLAAALYRYRTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHHIPFGLITSGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVGVGAVVFHDLKNERINSFDFNLDEVVRFEGETGPYVQYSHARAMSILRKAGDLELDSDNLEISDPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKYYAHSRILNDDAEKNARLALVQSVATTLKESLRLLGVKAPNEM GT:EXON 1|1-563:0| SW:ID SYR_LACS1 SW:DE RecName: Full=Arginyl-tRNA synthetase; EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase; Short=ArgRS; SW:GN Name=argS; OrderedLocusNames=LSL_0677; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->563|SYR_LACS1|0.0|100.0|563/563| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 408->420|eevaeavgvgavv| BL:PDB:NREP 1 BL:PDB:REP 24->563|1f7uA|e-101|37.8|535/606| RP:PDB:NREP 1 RP:PDB:REP 2->563|1bs2A|2e-54|32.6|558/603| RP:PFM:NREP 3 RP:PFM:REP 22->84|PF03485|5e-08|47.6|63/85|Arg_tRNA_synt_N| RP:PFM:REP 94->407|PF00750|9e-64|44.2|310/350|tRNA-synt_1d| RP:PFM:REP 450->563|PF05746|1e-21|43.9|114/118|DALR_1| HM:PFM:NREP 3 HM:PFM:REP 94->436|PF00750|9e-81|37.6|338/354|tRNA-synt_1d| HM:PFM:REP 450->563|PF05746|2.5e-34|43.9|114/119|DALR_1| HM:PFM:REP 7->84|PF03485|2.2e-20|45.9|74/83|Arg_tRNA_synt_N| GO:PFM:NREP 15 GO:PFM GO:0000166|"GO:nucleotide binding"|PF03485|IPR005148| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF03485|IPR005148| GO:PFM GO:0005524|"GO:ATP binding"|PF03485|IPR005148| GO:PFM GO:0005737|"GO:cytoplasm"|PF03485|IPR005148| GO:PFM GO:0006412|"GO:translation"|PF03485|IPR005148| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF03485|IPR005148| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00750|IPR015945| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF00750|IPR015945| GO:PFM GO:0005524|"GO:ATP binding"|PF00750|IPR015945| GO:PFM GO:0005737|"GO:cytoplasm"|PF00750|IPR015945| GO:PFM GO:0006412|"GO:translation"|PF00750|IPR015945| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF00750|IPR015945| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF05746|IPR008909| GO:PFM GO:0005524|"GO:ATP binding"|PF05746|IPR008909| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF05746|IPR008909| RP:SCP:NREP 3 RP:SCP:REP 3->82|1iq0A3|1e-17|32.1|78/96|d.67.2.1| RP:SCP:REP 108->444|1bs2A2|3e-80|40.5|333/348|c.26.1.1| RP:SCP:REP 444->563|1iq0A1|6e-33|44.1|118/126|a.27.1.1| HM:SCP:REP 1->105|1bs2A3|2.3e-30|43.3|104/131|d.67.2.1|1/1|Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain| HM:SCP:REP 106->444|1bs2A2|3.7e-94|42.1|335/348|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 444->563|1iq0A1|4.3e-34|44.1|118/126|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases|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ccHHccHHHHHHHccccccGGGccEEEEGGGGGccTTccHHHHHHHHHHHcccTTTEEEEEETTEEEEEEcHHHHHHHHHHHHHHHGGGTTccccccccEEEEEcccccTTccccHHHHHHHHHHHHHHHHHHHTTcEEEEEcccccccHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHcccccTTTcHHHHHHHHHTTcccccTTTTTTHHHHHHHHHHHHHHHHHHTTcccccccccTTccHHHHHHHHHHHHHHTcccccTTcEEEETcTTccEEEEEETTTEEcHHHHHHHHHHHHHHHHcccEEEEEccGGGHHHHHHHHHHHHHTccGGGGGEEEEccccEEcccccTTcccccHHHHHHHHHHHHHHHHHHcTTTccHcccHHHHHHHHHHHHHHHHHHcccTTccEEccHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHTccGGGcccHHHHHHHHHHHTHHHHHHHHHHHTcTHHHHHHHHHHHHHHHHHHHHcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHTccccccc DISOP:02AL 563-564| PSIPRED ccHHHHHHHHHHHHHHHcccHHHccHHccccccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccccEEEEEccEEEEEEcHHHHHHHHHHHHHHccHHccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHcccEEcccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccccHHEEEEEEEEEEEccccccccccccEEEHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccEEEcHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccc //