[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : asnS
DDBJ      :asnS         Asparaginyl-tRNA synthetase
Swiss-Prot:SYN_LACS1    RecName: Full=Asparaginyl-tRNA synthetase;         EC=6.1.1.22;AltName: Full=Asparagine--tRNA ligase;         Short=AsnRS;

Homologs  Archaea  68/68 : Bacteria  809/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.40.4d.104.1
:433 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->433 1x54A PDBj e-107 47.8 %
:RPS:PDB   11->426 3bjuC PDBj 1e-50 17.0 %
:RPS:SCOP  1->99 1b8aA1  b.40.4.1 * 2e-16 23.2 %
:RPS:SCOP  122->426 1nnhA  d.104.1.1 * 5e-75 31.1 %
:HMM:SCOP  10->103 1eovA1 b.40.4.1 * 9.8e-22 33.0 %
:HMM:SCOP  87->433 1eovA2 d.104.1.1 * 3.1e-92 35.0 %
:RPS:PFM   23->76 PF01336 * tRNA_anti 9e-05 40.0 %
:RPS:PFM   117->426 PF00152 * tRNA-synt_2 1e-51 42.3 %
:HMM:PFM   112->426 PF00152 * tRNA-synt_2 4.9e-83 33.0 297/323  
:HMM:PFM   17->95 PF01336 * tRNA_anti 4.5e-15 35.6 73/76  
:BLT:SWISS 1->433 SYN_LACS1 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99499.1 GT:GENE asnS GT:PRODUCT Asparaginyl-tRNA synthetase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 740300..741601 GB:FROM 740300 GB:TO 741601 GB:DIRECTION + GB:GENE asnS GB:PRODUCT Asparaginyl-tRNA synthetase GB:NOTE COG0017 [J] Aspartyl/asparaginyl-tRNA synthetases GB:PROTEIN_ID ABD99499.1 GB:DB_XREF GI:90820860 GB:GENE:GENE asnS LENGTH 433 SQ:AASEQ MKTISIIDAKHHVNEKVKIGVWLTNKRSSGKIAFLQLRDGSAYFQGVVVKNAVSEETFALAKEVKQETSLYVTGVIHEDKRSHFGYEIEIEEIEVVGESNEYPITPKEHGTDFLMDHRHLWLRSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDRDAYLSQSGQLYEEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQERYVAYLVQSVLDNCQYPLQILGRDTEVLKRYTELPYPRISYDEAIELLQQSGKFPDVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFYMKPHPTRDDVVICADMLAPEGYGEIIGGSERATDPKYLEEQIIKAGLDVKDYEWYLDLRRYGSVPHSGFGLGLERAVTWITGEDHIREAIPFPRLLNRIYP GT:EXON 1|1-433:0| SW:ID SYN_LACS1 SW:DE RecName: Full=Asparaginyl-tRNA synthetase; EC=6.1.1.22;AltName: Full=Asparagine--tRNA ligase; Short=AsnRS; SW:GN Name=asnS; OrderedLocusNames=LSL_0689; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->433|SYN_LACS1|0.0|100.0|433/433| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 87->94|eieieeie| BL:PDB:NREP 1 BL:PDB:REP 15->433|1x54A|e-107|47.8|416/434| RP:PDB:NREP 1 RP:PDB:REP 11->426|3bjuC|1e-50|17.0|412/501| RP:PFM:NREP 2 RP:PFM:REP 23->76|PF01336|9e-05|40.0|50/74|tRNA_anti| RP:PFM:REP 117->426|PF00152|1e-51|42.3|298/337|tRNA-synt_2| HM:PFM:NREP 2 HM:PFM:REP 112->426|PF00152|4.9e-83|33.0|297/323|tRNA-synt_2| HM:PFM:REP 17->95|PF01336|4.5e-15|35.6|73/76|tRNA_anti| GO:PFM:NREP 7 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01336|IPR004365| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 2 RP:SCP:REP 1->99|1b8aA1|2e-16|23.2|99/103|b.40.4.1| RP:SCP:REP 122->426|1nnhA|5e-75|31.1|270/293|d.104.1.1| HM:SCP:REP 10->103|1eovA1|9.8e-22|33.0|94/0|b.40.4.1|1/1|Nucleic acid-binding proteins| HM:SCP:REP 87->433|1eovA2|3.1e-92|35.0|343/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 2450 OP:NHOMOORG 1073 OP:PATTERN 11313122222212114433333111111111111111111111112111111133333333333122 222-21-1111--1--1----1---1------1111-1111--111--111111111111--111-1---211111111123-2122222222233211233232122211----1-1111111122122122211233322212122232211122---1--13212222-12--1-11-1-3323311222244444434344444432222244423213222222222232222222222222133333323333322223322332233223223332111333222222222223322232232223311333111114355444444444321443343433231241133222-222-2222112123111111111111111111111111111111111-11-11-1-1112311222112222-1111111111111----------11111-111111111111111111111111111111111-1-11111111111-----11-1-----111-----11-----111111-1-11--111---111111221--23122323121211222222222321111122211-1111111112111111112-11--2222111231122222222222222222222-21-2111122233332234444444444-4444444444444444444444223333333333333333333333333342222222222222222121111122221121222212121111243211111112122111111111111111111222122222112222222222222222222222233331-112233332112222212223222-22132323332111221123323323222112 3422432-93323334454454444444444444444444444333545544454443555533333323333333313333333344-47343434443334334246373749463243333453424K3-3343232533433323432354333446C34332334553434223S4332245A6494446A443 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 433 STR:RPRED 100.0 SQ:SECSTR HHTTccHHHHccccccEEEEEEEEEEEEccTEEEEEEEETTEEEEEEEETTTcccHHHHHHHHTTccTTcEEEEEEEEEEcTTccEEEEEEEEEEEEccccccccccccHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEcccccccccccEETTTTEEEEEccccHHHHHHHHHTTcEEEEEEEEEcccccccTTcccEEEEEEEEEETccHHHHHHHHHHHHHHHHHHHHcccEEEEcTTcTTcccEEEEcccccEEEEHHHHHHHHHTccccccccHHHHHHHHHHHHTGGGccccEEEEcccGGGcTTcccccccTTcccEEEEEETTETTEEEEEEEEccccHHHHHHHHHHHHHHHHTcHHHHHHHTTTcccEEEEEEEHHHHHHHHTTcccGGGccccccccccccc DISOP:02AL 1-1,432-434| PSIPRED cEEEEEcccHHHcccEEEEEEEEEEEcccccEEEEEEEcccEEEEEEEEcccccHHHHHHHHccccccEEEEEEEEEEcccccccEEEEEEEEEEEcccccccccHHHccHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccEEEEEEEcccccccccHHHHHHHHHHccccEEEEEEEEEccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccEEHHccccHHHHHHcccccccEEEHHHHHHHHHHcccccccccccccccHHHHHHHHHccccEEEccccccccccccccccccHHHHHHHHHHHccccEEEccHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHccccccEEEEcHHHHHHHHHccccHHEEEEcccccccccc //