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Lactobacillus salivarius UCC118 (lsal0)
Gene : ccpA
DDBJ      :ccpA         Catabolite control protein A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  569/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->335 1zvvA PDBj e-105 57.9 %
:RPS:PDB   7->335 1bdhA PDBj 5e-60 28.2 %
:RPS:SCOP  7->61 1bdhA1  a.35.1.5 * 1e-16 49.1 %
:RPS:SCOP  64->335 1rzrA2  c.93.1.1 * 3e-67 48.9 %
:HMM:SCOP  4->62 1efaA1 a.35.1.5 * 7.5e-20 49.2 %
:HMM:SCOP  64->335 1dbqA_ c.93.1.1 * 2.5e-69 34.9 %
:RPS:PFM   7->52 PF00356 * LacI 5e-10 60.9 %
:RPS:PFM   63->294 PF00532 * Peripla_BP_1 3e-34 33.3 %
:HMM:PFM   64->318 PF00532 * Peripla_BP_1 5.5e-24 21.8 252/279  
:HMM:PFM   7->52 PF00356 * LacI 8.3e-23 54.3 46/46  
:BLT:SWISS 5->335 CCPA_STRMU e-106 59.8 %
:PROS 8->26|PS00356|HTH_LACI_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99230.1 GT:GENE ccpA GT:PRODUCT Catabolite control protein A GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 463530..464537 GB:FROM 463530 GB:TO 464537 GB:DIRECTION + GB:GENE ccpA GB:PRODUCT Catabolite control protein A GB:NOTE COG1522 [K] Transcriptional regulators GB:PROTEIN_ID ABD99230.1 GB:DB_XREF GI:90820591 GB:GENE:GENE ccpA LENGTH 335 SQ:AASEQ MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVTNVYFSSLARGIDDVASMYKYNIILANSDANEQKELQVLNTLLAKQVDGIIFMGNKITDELRKQIDKTKTPVVLAGSLDDKEEFESVHINYVDAVEEAVSDLINHGNDKIAFISGPLSEPINSKYRLQGYKNALSKNGIACDEELVFETDYSYHSGEILWPALQSVGATAAYVGDDELAVGVLNGAQDAGAKVPTDFEIVTSNNSKLTELVRPKLSSITQPLYDIGAVSMRFLTKMMNKEETSADEKTIELPYGYIKRGSTK GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 5->335|CCPA_STRMU|e-106|59.8|328/333| PROS 8->26|PS00356|HTH_LACI_1|PDOC00366| BL:PDB:NREP 1 BL:PDB:REP 6->335|1zvvA|e-105|57.9|328/332| RP:PDB:NREP 1 RP:PDB:REP 7->335|1bdhA|5e-60|28.2|326/338| RP:PFM:NREP 2 RP:PFM:REP 7->52|PF00356|5e-10|60.9|46/46|LacI| RP:PFM:REP 63->294|PF00532|3e-34|33.3|231/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 64->318|PF00532|5.5e-24|21.8|252/279|Peripla_BP_1| HM:PFM:REP 7->52|PF00356|8.3e-23|54.3|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 7->61|1bdhA1|1e-16|49.1|55/56|a.35.1.5| RP:SCP:REP 64->335|1rzrA2|3e-67|48.9|270/272|c.93.1.1| HM:SCP:REP 4->62|1efaA1|7.5e-20|49.2|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 64->335|1dbqA_|2.5e-69|34.9|269/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4639 OP:NHOMOORG 576 OP:PATTERN -------------------------------------------------------------------- 8873m-1366A-11111--------B------2222239D6-3BNbP1HGD3UQQ-18--6568P5MOUH5HBBBHMK4---4-----2232-1-----1-7-419-94A--------------------------78854---C----------------------1-1-------------57122CB-C7BBBBAB98C7BAA989FFEEBBAB868D29679BBBAA4Q54444444444444452257C771882C516DDAA66856AA7666777887855577777677777555544555555557734377778418D2222222A296511478AI4331229--------K1-488881121-1EBB4-----3-433--------4434344434C---3--3125E--PFFDTLNWWTMI659157C74534856--------322-1--1------------------------------382712552499ADA77433366BH656548A893554--666A151155826E----1--3----------------1----11-3------------------E-----------------------------CCG6-77-84B5454633322312233115-------------JKIG7IEEEEDEEFEED-EDBEGECEFGEDEEFCEFEPPOIH88ADECCDCDDDDCCDCBCQBACDDCE7-JFHHFGHFGGHH---------------76D444759133334336------1---7644443658243452666----------A9AABBBBBDB9FF87AAAAA7881111---2----------------5------1---1--------------568624A655-2- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------4--1-----------2--1-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 335 STR:RPRED 100.0 SQ:SECSTR HcTccccHHHHHHHHTccHHHHHHHHHTcccccHHHHHHHHHHHHHHTccccHHHHHHHHTcccEEEEEEcccccHHHHHHHHHHHHHHHHTTcEEEEEEcTTcHHHHHHHHHHHHHTTccEEEEccccccHHHHHHHTTTTccEEEccccccccccEEEEccHHHHHHHHHHHHHHTTcccEEEEcccTTcHcHHHHHHHHHHHHHHHTTccccGGGcccccccHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHTTccTTTTcEEEEEEccTTGGGccccccEEEccHHHHHHHHHHHHHHHHHTccccccccEEEcccEEEcccccc DISOP:02AL 1-3,334-336| PSIPRED cccccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHcccccccEEEEEEEccHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHcccccccccEEEEccEEEEccccc //