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Lactobacillus salivarius UCC118 (lsal0)
Gene : clpE
DDBJ      :clpE         ATP-dependent clp protease ATP-binding subunit
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  892/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
a.2.9c.37.1
:730 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   99->729 1ksfX PDBj e-132 46.1 %
:RPS:PDB   105->226 3bbnG PDBj 3e-24 13.1 %
:RPS:PDB   210->673 1bpoB PDBj 1e-45 8.8 %
:RPS:SCOP  97->368 1qvrA2  c.37.1.20 * 8e-99 56.4 %
:RPS:SCOP  346->385 1qojA  a.2.9.1 * 4e-07 25.0 %
:RPS:SCOP  413->729 1ksfX3  c.37.1.20 * 7e-47 41.8 %
:HMM:SCOP  96->407 1qvrA2 c.37.1.20 * 2.3e-69 35.0 %
:HMM:SCOP  412->699 1qvrA3 c.37.1.20 * 1.7e-81 38.5 %
:RPS:PFM   141->286 PF05621 * TniB 3e-04 22.8 %
:RPS:PFM   463->623 PF07724 * AAA_2 3e-37 56.4 %
:RPS:PFM   633->701 PF10431 * ClpB_D2-small 5e-09 31.9 %
:HMM:PFM   462->627 PF07724 * AAA_2 5.4e-53 49.4 154/171  
:HMM:PFM   141->268 PF00004 * AAA 1.3e-15 25.7 113/130  
:HMM:PFM   633->714 PF10431 * ClpB_D2-small 4.9e-26 41.5 82/89  
:HMM:PFM   350->384 PF02151 * UVR 2.9e-09 40.0 35/36  
:HMM:PFM   120->161 PF01637 * Arch_ATPase 0.0001 31.0 42/234  
:HMM:PFM   423->490 PF06309 * Torsin 0.00022 30.3 66/127  
:BLT:SWISS 1->721 CLPE_STRPN 0.0 66.0 %
:PROS 231->243|PS00870|CLPAB_1
:PROS 497->515|PS00871|CLPAB_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99196.1 GT:GENE clpE GT:PRODUCT ATP-dependent clp protease ATP-binding subunit GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(423785..425977) GB:FROM 423785 GB:TO 425977 GB:DIRECTION - GB:GENE clpE GB:PRODUCT ATP-dependent clp protease ATP-binding subunit GB:NOTE COG0542 [O] ATPases with chaperone activity, ATP-binding subunit GB:PROTEIN_ID ABD99196.1 GB:DB_XREF GI:90820557 GB:GENE:GENE clpE LENGTH 730 SQ:AASEQ MLCQNCHKNPATIHLTTNLNGRQTSIDLCQNCYQEIKNEANGFNNIGQDPFGFGSLDDIFKAISNPNFSNQQSMSQEPPTQNSRIGGNNGNRNGDSSILGQYGLDLTEEAKNGQIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQKIVNGDVPQKLIGKKVIRLDVVSLVQGTGIRGQFEQRMQQLMKELKQQKDVILFIDEIHEIVGAGNAEGGMDAGNVLKPSLARGEFQLVGATTLNEFRTIEKDAALARRLQPVQVDEPSVEETIKILNGIRNKYEAYHHVKYTDEALRAAVTLSNRYIQDRFLPDKAIDLLDESGSRKNLTIHATDPKIIEERIKNAENQKQAALKEENYEKAAYYRDQVSRFEKMKDNASDKDTPVVTEKDMEHIIEEKTNIPVGELKAKEKEQLRDLGSSLEKHVIGQDEAVDKVARSIRRNRIGFNKSGRPIGSFLFVGPTGVGKTETAKQLARELFGTEDSMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEQVRRHPYSLILLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSGDSVVSVGFGAEANGSSHSVIDKLTKYFKPEFLNRFDDIIEFNPLSKDNLVKIVRLMLDDVNKMMADQNMHIDVSDKVADKLAELGYDPKMGARPLRRVIQEQIEDKIADFYLDNPNVQNFVADLDENGDIVIKSKSEKNED GT:EXON 1|1-730:0| BL:SWS:NREP 1 BL:SWS:REP 1->721|CLPE_STRPN|0.0|66.0|714/752| PROS 231->243|PS00870|CLPAB_1|PDOC00679| PROS 497->515|PS00871|CLPAB_2|PDOC00679| SEG 86->94|ggnngnrng| SEG 195->208|qrmqqlmkelkqqk| SEG 587->596|gsgdsvvsvg| BL:PDB:NREP 1 BL:PDB:REP 99->729|1ksfX|e-132|46.1|555/714| RP:PDB:NREP 2 RP:PDB:REP 105->226|3bbnG|3e-24|13.1|122/154| RP:PDB:REP 210->673|1bpoB|1e-45|8.8|419/493| RP:PFM:NREP 3 RP:PFM:REP 141->286|PF05621|3e-04|22.8|145/248|TniB| RP:PFM:REP 463->623|PF07724|3e-37|56.4|149/160|AAA_2| RP:PFM:REP 633->701|PF10431|5e-09|31.9|69/90|ClpB_D2-small| HM:PFM:NREP 6 HM:PFM:REP 462->627|PF07724|5.4e-53|49.4|154/171|AAA_2| HM:PFM:REP 141->268|PF00004|1.3e-15|25.7|113/130|AAA| HM:PFM:REP 633->714|PF10431|4.9e-26|41.5|82/89|ClpB_D2-small| HM:PFM:REP 350->384|PF02151|2.9e-09|40.0|35/36|UVR| HM:PFM:REP 120->161|PF01637|0.0001|31.0|42/234|Arch_ATPase| HM:PFM:REP 423->490|PF06309|0.00022|30.3|66/127|Torsin| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF07724|IPR013093| RP:SCP:NREP 3 RP:SCP:REP 97->368|1qvrA2|8e-99|56.4|243/357|c.37.1.20| RP:SCP:REP 346->385|1qojA|4e-07|25.0|40/46|a.2.9.1| RP:SCP:REP 413->729|1ksfX3|7e-47|41.8|292/306|c.37.1.20| HM:SCP:REP 96->407|1qvrA2|2.3e-69|35.0|266/0|c.37.1.20|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 412->699|1qvrA3|1.7e-81|38.5|288/315|c.37.1.20|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2930 OP:NHOMOORG 1079 OP:PATTERN ----------------------------------1-----1--11--2-1------------------ 2372422244222222222-22222222222222223444243232222222323232224322236443223223222224322222432312223--2232224232222222222222222433333333333444452226234334442233333333333454563333333333333332222123222222222222222222222222233322223333432153333333443334432222333334333334433444543533333363333344333333333333333333334333554333333332243222222223222444222233421222222212211111112213332222422222233232222222322222222223-24224432232233332342222232222234323322233333333333322222222222222--11111121111112122-2223233324755356557777566888837634555322323323223322422232322322222222222233222222232332222111122131335398222112222222222222222222122223334434222322222232222222222331-22222------24233232333244443-3123223325343222223433336532433432333333332422222232-3777777477761122222222222236331111211111111113333333222428888344454344343311111111124343333333444322324224452222222233333322222212331----1-11111111111111--1112223332233242 33--223-74212222322222222222232222222222322222222222222222223223222222222232213222122222-2823223222223134412B321111-11111111311313B1-21211112111-111-111121-1121--1212-------3145B5t44454B8BI3AA4653423 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,6-6,36-47,65-96,338-355,357-360,363-365,387-391,417-424,721-731| PSIPRED ccccccccccccEEccEEEcccHHHHHHHHHHHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccEEEccccccHHHHHHHHHHHHHcccccHHHcccEEEEEEHHHHHcccccccHHHHHHHHHHHHHHHHcccEEEEEcHHHHccccccccccHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHHcccEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHccccccccccccccHHHHHHHHccccEEEEEEHHHccHHHHHHHHHHHHccccccccccEEccccEEEEEcccccccccEEEEcccccHHHHHHHHHHHHHHHccHHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEEEEccccccc //