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Lactobacillus salivarius UCC118 (lsal0)
Gene : clpL
DDBJ      :clpL         ATP-dependent clp protease ATP-binding subunit
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  892/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.338.1
:702 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   72->693 1qvrA PDBj e-121 51.0 %
:RPS:PDB   77->197 3bbnG PDBj 7e-29 14.9 %
:RPS:PDB   182->570 1bpoA PDBj 4e-35 10.8 %
:RPS:PDB   551->694 1b94A PDBj 4e-21 8.4 %
:RPS:SCOP  72->345 1qvrA2  c.37.1.20 * 6e-91 52.1 %
:RPS:SCOP  323->368 1zhtA1  d.338.1.1 * 8e-04 32.6 %
:RPS:SCOP  390->698 1ksfX3  c.37.1.20 * 4e-40 40.0 %
:HMM:SCOP  69->388 1qvrA2 c.37.1.20 * 4.2e-64 31.7 %
:HMM:SCOP  389->702 1qvrA3 c.37.1.20 * 1.1e-74 38.7 %
:RPS:PFM   114->249 PF00004 * AAA 8e-09 35.6 %
:RPS:PFM   440->565 PF07724 * AAA_2 3e-29 58.4 %
:RPS:PFM   607->675 PF10431 * ClpB_D2-small 9e-08 37.7 %
:HMM:PFM   439->600 PF07724 * AAA_2 4.4e-45 43.6 149/171  
:HMM:PFM   114->246 PF00004 * AAA 2.2e-16 28.4 116/130  
:HMM:PFM   607->688 PF10431 * ClpB_D2-small 9.5e-25 42.7 82/89  
:HMM:PFM   93->128 PF01637 * Arch_ATPase 0.00027 38.9 36/234  
:BLT:SWISS 18->696 CLPC_STRP6 0.0 75.6 %
:PROS 474->492|PS00871|CLPAB_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98880.1 GT:GENE clpL GT:PRODUCT ATP-dependent clp protease ATP-binding subunit GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 67810..69918 GB:FROM 67810 GB:TO 69918 GB:DIRECTION + GB:GENE clpL GB:PRODUCT ATP-dependent clp protease ATP-binding subunit GB:NOTE COG0542 [O] ATPases with chaperone activity, ATP-binding subunit GB:PROTEIN_ID ABD98880.1 GB:DB_XREF GI:90820241 GB:GENE:GENE clpL LENGTH 702 SQ:AASEQ MNNTPFDNFNNMDDIFNELMGSMNGINSERRYLINGREVTPEEFAQYRKTGKLPNNNQMTSQGKAPNKDGILAKLGRNLTQEAREGKLDPVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPASIKNKEIISIDISGLEAGTQYRGSFEENIQNLIKEVKDRGNVILFFDEIHQILGAGGMGGDNGSKGLADILKPALSRGEITVIGATTQDEYRNTIMKNAALARRFNQVTVNAPSPEDTFKILQGIRNLYEKHHNVVLPDNVLKAAVDYSIQYIPQRSLPDKAIDLIDMTAAHLAAKHPVTDVKELENQIKDEKEKQQAAADKEDYEAALNAKTKIEELQKKIDNHSESQKVTATVNDVAEAVERLTGIPVSKMGASDIERLKEIGKRLKGKVIGQDEAVNAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIRLDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTIDFKNTVIIATSNAGFGNEDLMGKDEKEDKDIMKKIAPYFRPEFLNRFNAVIEFSHLTKEDLKEIIDLMLDEVNKTLAKKGLDLVVTDAAKNYLIEQGYDEAMGARPLRRVIEQQIRDKVTDFYLDNVDVKHLLADMKDGELVISERKDADK GT:EXON 1|1-702:0| BL:SWS:NREP 1 BL:SWS:REP 18->696|CLPC_STRP6|0.0|75.6|675/699| PROS 474->492|PS00871|CLPAB_2|PDOC00679| SEG 6->17|fdnfnnmddifn| SEG 419->432|avnavarairrnra| SEG 574->586|kdekedkdimkki| BL:PDB:NREP 1 BL:PDB:REP 72->693|1qvrA|e-121|51.0|565/803| RP:PDB:NREP 3 RP:PDB:REP 77->197|3bbnG|7e-29|14.9|121/154| RP:PDB:REP 182->570|1bpoA|4e-35|10.8|353/487| RP:PDB:REP 551->694|1b94A|4e-21|8.4|143/244| RP:PFM:NREP 3 RP:PFM:REP 114->249|PF00004|8e-09|35.6|118/123|AAA| RP:PFM:REP 440->565|PF07724|3e-29|58.4|113/160|AAA_2| RP:PFM:REP 607->675|PF10431|9e-08|37.7|69/90|ClpB_D2-small| HM:PFM:NREP 4 HM:PFM:REP 439->600|PF07724|4.4e-45|43.6|149/171|AAA_2| HM:PFM:REP 114->246|PF00004|2.2e-16|28.4|116/130|AAA| HM:PFM:REP 607->688|PF10431|9.5e-25|42.7|82/89|ClpB_D2-small| HM:PFM:REP 93->128|PF01637|0.00027|38.9|36/234|Arch_ATPase| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| GO:PFM GO:0005524|"GO:ATP binding"|PF07724|IPR013093| RP:SCP:NREP 3 RP:SCP:REP 72->345|1qvrA2|6e-91|52.1|240/357|c.37.1.20| RP:SCP:REP 323->368|1zhtA1|8e-04|32.6|46/433|d.338.1.1| RP:SCP:REP 390->698|1ksfX3|4e-40|40.0|295/306|c.37.1.20| HM:SCP:REP 69->388|1qvrA2|4.2e-64|31.7|315/0|c.37.1.20|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 389->702|1qvrA3|1.1e-74|38.7|305/315|c.37.1.20|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2922 OP:NHOMOORG 1080 OP:PATTERN ----------------------------------1-----1--11--2-1------------------ 2372422244222222222-22222222222222223444243232222222323232224322236443223223222224322222432312223--2232224232222222222222222333333333333444452226234334442233333333333454563333333333333332222123222222222222222222222222233322223333432153333333443334432222333334333334433444543533333363333344333333333333333333334333554333333332243222222223222334222233321222222212211111112213332222422222233232222222322222222223-24224432232233332342222232222234323322233333333333322222222222222--11111121111112122-2223233324755356557777566888837634555322323323223322422232322322222222222233222222232332222111122131335398222112222222222222222222122223334434222322222232222222222331-22222------24233232333244443-3123223325343222223433336532433432333333332422222232-3777777477761122222222222236331111211111111113333333222428888344454344343311111111124343333333444322324224452222222233333322222212331----1-11111111111111--1112223332233242 3311223-73212222322222222222232222222222322222222222222222222223222222222232213222122222-2823223222223134412B321111-11111111311313B1-21211112111-111--11121-1121--1112-------3145B5t44454A9BH2AA4653423 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,42-74,355-368,433-434,567-582,695-703| PSIPRED cccccccccccHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccHHHHHHcccHHHHHHccccccccccHHHHHHHHHHHccccccccEEEccccccHHHHHHHHHHHHHcccccHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEcHHHHccccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHccHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHHHHccccccEEEEEcHHHccHHHHHHHcccccccccccccHHHHHHHHHcccccEEEEEcHHHccHHHHHHHHHHHHHHccccccccEEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHHHccHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEEcccccc //