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Lactobacillus salivarius UCC118 (lsal0)
Gene : comEA
DDBJ      :comEA        ComE operon protein 1
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  337/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.60.16a.60.2d.15.13
:229 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   169->229 2oceA PDBj 2e-09 39.3 %
:RPS:PDB   168->229 2eduA PDBj 4e-13 32.3 %
:RPS:SCOP  76->142 2fug13  d.15.13.1 * 2e-09 22.4 %
:RPS:SCOP  115->229 3ci0K2  a.60.16.1 * 3e-15 7.8 %
:HMM:SCOP  159->228 2a1jB1 a.60.2.5 * 7.1e-08 24.3 %
:RPS:PFM   76->116 PF10531 * SLBB 9e-04 39.0 %
:RPS:PFM   166->229 PF03934 * GspK 4e-06 44.3 %
:HMM:PFM   168->196 PF00633 * HHH 1.1e-09 44.8 29/30  
:HMM:PFM   199->223 PF00633 * HHH 2.7e-06 36.0 25/30  
:HMM:PFM   76->129 PF10531 * SLBB 1.3e-11 29.6 54/59  
:BLT:SWISS 64->229 COMEA_BACSU 2e-28 43.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99488.1 GT:GENE comEA GT:PRODUCT ComE operon protein 1 GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 726811..727500 GB:FROM 726811 GB:TO 727500 GB:DIRECTION + GB:GENE comEA GB:PRODUCT ComE operon protein 1 GB:NOTE COG1555 [L] DNA uptake protein and related DNA-binding proteins GB:PROTEIN_ID ABD99488.1 GB:DB_XREF GI:90820849 GB:GENE:GENE comEA LENGTH 229 SQ:AASEQ MKEEIKEKLQEFLENNKWQIVTIVIAIIVTLIFVLPTKHSDSDTFEISSSSTSQISKVSTSVPQVKSSVTKKEIFVDIKGAVKHPGLYKAKPNQRLAYIIQQAGGLENNADVSKLNYAHKLSDQMMIYVPKQGENYTGDVIIELQSENTMSSDTSNSNTTEEAGDNSKINLNTATKEQLTQLNGIGDKKAELIISYRDEHGKFKTIDELKNVSGIGDKTFAAISDKLTV GT:EXON 1|1-229:0| BL:SWS:NREP 1 BL:SWS:REP 64->229|COMEA_BACSU|2e-28|43.1|153/205| TM:NTM 1 TM:REGION 15->36| SEG 20->35|ivtiviaiivtlifvl| SEG 40->62|sdsdtfeisssstsqiskvstsv| SEG 146->162|sentmssdtsnsnttee| BL:PDB:NREP 1 BL:PDB:REP 169->229|2oceA|2e-09|39.3|61/729| RP:PDB:NREP 1 RP:PDB:REP 168->229|2eduA|4e-13|32.3|62/98| RP:PFM:NREP 2 RP:PFM:REP 76->116|PF10531|9e-04|39.0|41/54|SLBB| RP:PFM:REP 166->229|PF03934|4e-06|44.3|61/268|GspK| HM:PFM:NREP 3 HM:PFM:REP 168->196|PF00633|1.1e-09|44.8|29/30|HHH| HM:PFM:REP 199->223|PF00633|2.7e-06|36.0|25/30|HHH| HM:PFM:REP 76->129|PF10531|1.3e-11|29.6|54/59|SLBB| GO:PFM:NREP 2 GO:PFM GO:0009306|"GO:protein secretion"|PF03934|IPR005628| GO:PFM GO:0016021|"GO:integral to membrane"|PF03934|IPR005628| RP:SCP:NREP 2 RP:SCP:REP 76->142|2fug13|2e-09|22.4|67/84|d.15.13.1| RP:SCP:REP 115->229|3ci0K2|3e-15|7.8|103/110|a.60.16.1| HM:SCP:REP 159->228|2a1jB1|7.1e-08|24.3|70/0|a.60.2.5|1/1|RuvA domain 2-like| OP:NHOMO 346 OP:NHOMOORG 338 OP:PATTERN -------------------------------------------------------------------- ----1-11---11--------------------111----1------1------1--11111-1-11111--------1111------------------------------------------------------11111---1-------------------------------------------11-11111111111111111111111111111-11--111111111--1-11111---11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111-1111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111--------11--2---11----------------------------132111111-----------21----111-1-1--11111111-1---1111111---3---2------11-1-1-1111111111-1111111111111111111111---1-1111111111111111-1111111------------------------------------11------1--1111111111-1--------1------1----------11--------111--------------------------------------------------------------111111-111--- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 67.2 SQ:SECSTR ###########################################################################cEEEEEEccccTTTTTTTccTTcEEEEEcTTccccEEEEEcTTcccccccccccccccTTTcccccccccccccccTTcTTcHHHHccccTTHHHHHHccHHHHHHcTTccHHHHHHHHHHHHHHcccccGGGGGGcTTccHHHHHHHHHHHHH DISOP:02AL 1-5,50-73,134-166| PSIPRED ccHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHccccccccccccccEEEEEEEEEEccccEEEEcccccHHHHHHHccccccccHHccccHHHccccccEEEEccccccccccccccccccccccccccccccHHHcccccccEEccccHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHccccc //