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Lactobacillus salivarius UCC118 (lsal0)
Gene : cydA
DDBJ      :cydA         Cytochrome d ubiquinol oxidase subunit I
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  612/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:472 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   6->451 PF01654 * Bac_Ubq_Cox 1e-94 44.8 %
:HMM:PFM   6->453 PF01654 * Bac_Ubq_Cox 1.5e-170 47.5 434/436  
:BLT:SWISS 1->472 CYDA_BACSU e-140 52.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99840.1 GT:GENE cydA GT:PRODUCT Cytochrome d ubiquinol oxidase subunit I GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1054945..1056363) GB:FROM 1054945 GB:TO 1056363 GB:DIRECTION - GB:GENE cydA GB:PRODUCT Cytochrome d ubiquinol oxidase subunit I GB:NOTE COG1271 [C] Cytochrome bd-type quinol oxidase, subunit 1 GB:PROTEIN_ID ABD99840.1 GB:DB_XREF GI:90821201 GB:GENE:GENE cydA LENGTH 472 SQ:AASEQ MSILSLARFQFAMTTIFHFFFVPFSIGMVFMVALMETCYVRTKNEAYKKMTKFWGNIFLLSFAVGVVTGLIQEFQFGMNWSDYSRFMGDIFGAPLAMEALLSFFIESTFIGLWMFTWDRVKPGLHLFFVWMVVIGTMTSALWILTANSFMQHPVGYTIRNGRAEMTSFSALLRNPQVWYEWGHVISGAIMMGGVVVAGMAAFRLLKRKSLSEVSKDIFKRSMRLGMIVSLLGSLSVMGVGDLQMKDLLHTQPMKFSAMEALYKDTGKSAGWTVVGIADTKNHKTNYTIEIPGMLSVLSYGKTTGSVKGMDTINKELQAKYGTKNNYYVPVNTLFWSFRVMAGFGALTFLVSALGLFFTRKKKASLFNTNWMLWVVALMTFTPFLANTCGWLITELGRYPWTVYGLFTIAQSVSPSVSATSLLISNILYFAIFTVLAIVMVGFVVKELRKGPDEASEPEFAKHGLDPFDKEAF GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 1->472|CYDA_BACSU|e-140|52.7|463/468| TM:NTM 9 TM:REGION 10->32| TM:REGION 53->75| TM:REGION 90->112| TM:REGION 125->147| TM:REGION 181->203| TM:REGION 222->244| TM:REGION 335->357| TM:REGION 369->391| TM:REGION 420->442| SEG 190->201|mmggvvvagmaa| RP:PFM:NREP 1 RP:PFM:REP 6->451|PF01654|1e-94|44.8|429/432|Bac_Ubq_Cox| HM:PFM:NREP 1 HM:PFM:REP 6->453|PF01654|1.5e-170|47.5|434/436|Bac_Ubq_Cox| GO:PFM:NREP 3 GO:PFM GO:0016020|"GO:membrane"|PF01654|IPR002585| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01654|IPR002585| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01654|IPR002585| OP:NHOMO 971 OP:NHOMOORG 630 OP:PATTERN -----1----------1--1-11--421-1--------------------11-----1---222---- 11111-11111--111111-11--1211111-11112111111111111111111-11--11111122112--------111-11-111111-111----11-1-1-1-111111111111111111-11-11-11--------2-1111---1111-------11141---------------1------12233333333233333312222233312111111111112-111111111111111111111-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------2--1-11-1----11--------111111-----122111-11113111111111111-33234133211-3111-111111131-1-11111111--2222222221111-31------------11111111111111-1---12-1333233332333222255533333124542222-1112-1---11111-11--2-211----------12--1211111121111121211111122221113111-111111--1--------111-11221311211121222211221221121211--1-11-------23122322222222222-2222222222222222222332223233333333333333232222222221-211111111111---12222122221111311111111111111122222121112111212222112112111211112121-111133333122112234344333-------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 453-473| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccEEEEEEEcccHHHHHHccccccccccHHHccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccEEHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc //