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Lactobacillus salivarius UCC118 (lsal0)
Gene : cydB
DDBJ      :cydB         Cytochrome d ubiquinol oxidase subunit II
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  549/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:338 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   4->326 PF02322 * Cyto_ox_2 8e-47 38.4 %
:HMM:PFM   4->326 PF02322 * Cyto_ox_2 3.5e-111 44.9 323/328  
:BLT:SWISS 31->329 CYDB_BACSU 1e-58 39.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99839.1 GT:GENE cydB GT:PRODUCT Cytochrome d ubiquinol oxidase subunit II GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1053928..1054944) GB:FROM 1053928 GB:TO 1054944 GB:DIRECTION - GB:GENE cydB GB:PRODUCT Cytochrome d ubiquinol oxidase subunit II GB:NOTE COG1294 [C] Cytochrome bd-type quinol oxidase, subunit 2 GB:PROTEIN_ID ABD99839.1 GB:DB_XREF GI:90821200 GB:GENE:GENE cydB LENGTH 338 SQ:AASEQ MTALQFLWFILIGVLFAGFFFLDGFDYGVGMATKTLAQNDAERTQLIRTIGPVWDGNEVWLITAGGAMFASFPYWYASLFSGYYLILLIILLGLIIRGVSFEFRHHAEGAKKRTWDWTLAIGSFIVPFFFGILFISMVQGMPIDANGNMHAGFFDYINVFSVVGGVALTLLVYLHGLNYIALKTEGAIRDRAKNYAQFLYWVLYVGLVVFALLLIFQTDFLRVHPISTLAILVVIVLLTVLAHVSVFKGKEINSFIYSGLTLVALVALLFSGLFPHLMISSISAKYNLVISTASSTPYTLKIMTIATFCLLPFVLAYTIWAYYIFRRRIKMPTITEGE GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 31->329|CYDB_BACSU|1e-58|39.5|299/338| TM:NTM 9 TM:REGION 2->24| TM:REGION 49->71| TM:REGION 80->102| TM:REGION 119->141| TM:REGION 154->176| TM:REGION 195->217| TM:REGION 224->246| TM:REGION 258->280| TM:REGION 301->323| SEG 13->30|gvlfagfffldgfdygvg| SEG 82->96|gyylilliillglii| SEG 228->242|tlailvvivlltvla| RP:PFM:NREP 1 RP:PFM:REP 4->326|PF02322|8e-47|38.4|323/328|Cyto_ox_2| HM:PFM:NREP 1 HM:PFM:REP 4->326|PF02322|3.5e-111|44.9|323/328|Cyto_ox_2| GO:PFM:NREP 2 GO:PFM GO:0016020|"GO:membrane"|PF02322|IPR003317| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02322|IPR003317| OP:NHOMO 819 OP:NHOMOORG 555 OP:PATTERN ---------------------------1-1--------------------11-----1---------- 1111--11111--111111-11--11111111111111111---11111111111-11--11111111111--------111-11-11---1--------1----1-1-111111111111111111-11-11-11--------1-1111---1111-------11141---------------1------1-1222222221222222--1111222-------1111111---------------------1-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------1--1-11-1----11--------11111------122111-11113-11111111111-331341321-1-3111-111111131-1-11-11111--2222222221111-31------------11111111111111-1----2-1222123332333222255523333124542222-1112-2---11111-11--2-211----------12--121-11112111111-11111111111--13-------------------------11221211211121222211121221111211--1-11-------23122312222222122-2222222222222222222332223232222222222222221222222221-211111111111---11211222221111311111111111111122222121112111212222112112111222122122-111133333122112234344221-------------------------------------------------------------11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 332-339| PSIPRED cccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccccc //