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Lactobacillus salivarius UCC118 (lsal0)
Gene : cydC
DDBJ      :cydC         Transport ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  909/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:586 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   262->579 3g60A PDBj 1e-38 32.1 %
:RPS:PDB   348->566 3b5jA PDBj 2e-52 35.6 %
:RPS:SCOP  19->140 2hydA2  f.37.1.1 * 2e-09 23.1 %
:RPS:SCOP  348->579 1b0uA  c.37.1.12 * 4e-37 30.0 %
:HMM:SCOP  12->347 2hydA2 f.37.1.1 * 1e-31 19.9 %
:HMM:SCOP  348->568 1pf4A1 c.37.1.12 * 1e-58 33.9 %
:RPS:PFM   389->512 PF00005 * ABC_tran 1e-11 40.2 %
:RPS:PFM   486->552 PF02463 * SMC_N 1e-04 35.8 %
:HMM:PFM   389->512 PF00005 * ABC_tran 5.6e-24 40.5 111/118  
:HMM:PFM   32->204 PF00664 * ABC_membrane 2.6e-08 17.4 161/275  
:HMM:PFM   377->395 PF01935 * DUF87 0.00011 52.6 19/229  
:BLT:SWISS 11->583 CYDD_BACSU e-127 43.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99837.1 GT:GENE cydC GT:PRODUCT Transport ATP-binding protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1050451..1052211) GB:FROM 1050451 GB:TO 1052211 GB:DIRECTION - GB:GENE cydC GB:PRODUCT Transport ATP-binding protein GB:NOTE COG4987 [CO] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components GB:PROTEIN_ID ABD99837.1 GB:DB_XREF GI:90821198 GB:GENE:GENE cydC LENGTH 586 SQ:AASEQ MFKKIPLLQELKKDTWVKPFLKKYKKTLVLAIFLGILTFFCAGALMFNSGYLISRSATRPENILLVYVPIVLTRAFGVGRPVFHYLERLTSHNWVFKMTSDLRVKLYKALEKDAVFFKSKYQLGDVLGLLSEDINHIQNLYLRTIFPTFVAWGLYVFIVIGVGIFSIWMGLLMLLMIGIMLVAFPIWSVIVNGARQEYEKKIKNELYLDLTDNIVGITDWIFAQRGRDYVKLHEQNEEKLMDVQEKLHHFDQIRDYLLQLVFMLVVVSFILWGGTYLGGSNGVYTGLANWIAAFVLCLFPVVDAFAVIPAASQETNVYKDSLVRLNRLQDNSFEEEKSEIKLIAPYDIKLDNVHFRYENGSREILKGINLDISSGDKLAILGRSGSGKSTLANLIRGDRVATEGAITINGIDVSKVGDQISNYIGVIHQTPYLFNTTILNNLRIGNEEATIEQVWQVLERVGLKDMVKALPQGLETMVDEAGMRFSGGERHRMALARILLKDAPIIILDEPTVGLDPLTEQEVISIFNRELKDKTLIWITHHLQGVEAMDQVIFIEDGTIEMQGSPDYLRKTNERYQKLKAIDEGR GT:EXON 1|1-586:0| BL:SWS:NREP 1 BL:SWS:REP 11->583|CYDD_BACSU|e-127|43.3|568/575| TM:NTM 5 TM:REGION 28->50| TM:REGION 145->167| TM:REGION 172->194| TM:REGION 255->277| TM:REGION 290->312| SEG 156->165|vfivigvgif| SEG 169->181|mgllmllmigiml| BL:PDB:NREP 1 BL:PDB:REP 262->579|3g60A|1e-38|32.1|312/1182| RP:PDB:NREP 1 RP:PDB:REP 348->566|3b5jA|2e-52|35.6|219/243| RP:PFM:NREP 2 RP:PFM:REP 389->512|PF00005|1e-11|40.2|107/123|ABC_tran| RP:PFM:REP 486->552|PF02463|1e-04|35.8|67/536|SMC_N| HM:PFM:NREP 3 HM:PFM:REP 389->512|PF00005|5.6e-24|40.5|111/118|ABC_tran| HM:PFM:REP 32->204|PF00664|2.6e-08|17.4|161/275|ABC_membrane| HM:PFM:REP 377->395|PF01935|0.00011|52.6|19/229|DUF87| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 2 RP:SCP:REP 19->140|2hydA2|2e-09|23.1|121/323|f.37.1.1| RP:SCP:REP 348->579|1b0uA|4e-37|30.0|227/258|c.37.1.12| HM:SCP:REP 12->347|2hydA2|1e-31|19.9|316/0|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 348->568|1pf4A1|1e-58|33.9|221/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 47934 OP:NHOMOORG 1175 OP:PATTERN ON87MEGEOOPLOKPLaHLMDKGYoLPagQbPFCEDC9HGHEBTVOTjKQ*wb8LZIOVKNKJCV169 MQiG*ZeennoUURURROO-OdAAY*OOOOOQmppqu***LwS*r*pfodWLxyzMSh99kwsk*hv***acYXXydajP*icCADADUVQJ5MCFL1-EGSJKHdMYKT54444446569999EUNGRXOKUUYPdjjtwHGG*PrkopeckZbVVSKPKSKbfZn***ZLTKMILHQIMJIWSYJImbBPcy************************gjt**jrz**xtz**XjklklhiijjjjiiYfYac*pcg**hRkfsxxPP**fXUcmkikoqquzys****vyvtspvyqusdddcbefghhhbd*svkjivvylk*w*********h*kw***cfec*tly**mpRG**odTXgeTXfcnkNYaVMcVPPJLLLIMdT***ZSr****x**v**z*yw**-fl*bZ*h***QD**************KEN**********RQRRRRRRmQWJQhV*66676666767988BC8ABA8999A97B7KDEKDEs**t*******ststm*****yyycv******s9Iuunwfjjj*w****WgcKXKOhPEGECFEETTQUmbZs*MZRlfObqSSeIdbaTSSdQZONPMtrRuOLKNFJHJLHE99BDCABABGOEFIMLojtToVaHRKuOVWYUOUYUSSVRYXaXXX5-HJUPM332222*t**W*tw*z*x*z*uv-*uvxyvyyx***yrtvssu*****pvfqtlpnrqrrsoprppo*rmkrrrrU6************44LFEHEEFNPPPKFzc*XVWVbTHOPONUOQbKMONMGUGKTkbnpnmt***n**vqb***FFGDFGGFFMiqo*nooonz**vvOPNJKKKJLLDDDD98NRSRIIHJ77665867*CXCBBBD-BBDAED9IJHCCKB9AAAAUgmVQd*ekdDZJ 7799pnR-yRDAalWMRULNUZWhViVMMGHHHVXSIQPPMMLHHGWQUgabkfQQXMNLLMHDE9AB2GA6FEHCD2DF9BBBIF69-VkGRPTOFFFLFBJTVJ8Twr*gqf*q*XPNNOeT**P*M***3*b*UQROpNR*jMWQRInNJ*PfbazQq*V*YbT*js*ys*eIPMI*AFHNOxlm*L**QO****f ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-5,8-10,329-345,585-587| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEEccccccccccccEEEEccccEEEEEccccccHHHHHHHHHHcccccccEEEEccEEHHHccHHHHHHccEEccccccccccHHHHHHcccccccHHHHHHHHHHccHHHHHHHccHHHccccccccccccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccHHHHHcccEEEEEEccEEEEcccHHHHHHcccHHHHHHHHHHcc //