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Lactobacillus salivarius UCC118 (lsal0)
Gene : cydD
DDBJ      :cydD         Transport ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  907/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:574 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   62->563 2hydA PDBj 6e-49 27.4 %
:RPS:PDB   177->292 2bnlB PDBj 3e-10 7.8 %
:RPS:PDB   332->564 3b5jA PDBj 4e-44 33.2 %
:RPS:SCOP  29->312 2hydA2  f.37.1.1 * 4e-22 18.8 %
:RPS:SCOP  332->542 1sgwA  c.37.1.12 * 2e-29 19.5 %
:HMM:SCOP  13->330 2hydA2 f.37.1.1 * 1.1e-44 20.1 %
:HMM:SCOP  311->552 1pf4A1 c.37.1.12 * 1.8e-56 34.5 %
:RPS:PFM   87->270 PF00664 * ABC_membrane 9e-17 23.4 %
:RPS:PFM   371->497 PF00005 * ABC_tran 4e-11 41.1 %
:RPS:PFM   507->574 PF08618 * Opi1 7e-04 35.3 %
:HMM:PFM   371->497 PF00005 * ABC_tran 7.2e-25 44.2 113/118  
:HMM:PFM   47->270 PF00664 * ABC_membrane 1.7e-24 21.0 224/275  
:BLT:SWISS 33->572 CYDC_BACSU e-129 46.3 %
:PROS 468->482|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99838.1 GT:GENE cydD GT:PRODUCT Transport ATP-binding protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1052204..1053928) GB:FROM 1052204 GB:TO 1053928 GB:DIRECTION - GB:GENE cydD GB:PRODUCT Transport ATP-binding protein GB:NOTE COG4988 [CO] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components GB:PROTEIN_ID ABD99838.1 GB:DB_XREF GI:90821199 GB:GENE:GENE cydD LENGTH 574 SQ:AASEQ MFDKGLLTLTDIKKTMRGLVGLYILQAFLIVGQAVSLGLVITHLWNGKPLKEQFIYIIGFMISFAGREGLQWWSNRWLDDYARVEAKKLRKTLLEKVFILGPELVQKQGTGHMVTLTLDGISEVEDYIQLTLSKMISMMIVPIVVLAMAFYLDWVSGVILFFIYPLIVLFMIILGYAAKAKADKQFVSFQRLSNHFIDSLRGIDTLKYFGLSKRYANSIYKTSERFRKTTMSVLRVAILSTFALDFFTTLSIAVVAVFLGLRLINGEITLFPALTVLILSPEYFLPIRAFANDYHATLNGKNSFHSIQEIINSAEVKESKLELHQWQPTDSLKLDNIEFAYDDNAEPVKFNTEFTGYQKVGIIGMSGAGKTTLINLLSGFLPLKNGKFEIQGKETTDLNEDAWRNQIIYIPQSPYIFDNTLRYNIAFYTPDASDEEIIEAIKAVGLEDLLEELPDKLDTLIGNGQRTLSGGQAQRIALARAFLDKQRKVLIFDEPTAHLDIETELELKERMLPLMKDRLVIFATHRLHWMKDMDKIVVLKDGKIAEEGQYDELLAHQAYFYELLNRAKGGEKNV GT:EXON 1|1-574:0| BL:SWS:NREP 1 BL:SWS:REP 33->572|CYDC_BACSU|e-129|46.3|534/567| PROS 468->482|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 5 TM:REGION 15->37| TM:REGION 130->152| TM:REGION 158->179| TM:REGION 234->256| TM:REGION 268->290| SEG 446->460|ledlleelpdkldtl| BL:PDB:NREP 1 BL:PDB:REP 62->563|2hydA|6e-49|27.4|489/578| RP:PDB:NREP 2 RP:PDB:REP 177->292|2bnlB|3e-10|7.8|115/126| RP:PDB:REP 332->564|3b5jA|4e-44|33.2|232/243| RP:PFM:NREP 3 RP:PFM:REP 87->270|PF00664|9e-17|23.4|184/274|ABC_membrane| RP:PFM:REP 371->497|PF00005|4e-11|41.1|112/123|ABC_tran| RP:PFM:REP 507->574|PF08618|7e-04|35.3|68/138|Opi1| HM:PFM:NREP 2 HM:PFM:REP 371->497|PF00005|7.2e-25|44.2|113/118|ABC_tran| HM:PFM:REP 47->270|PF00664|1.7e-24|21.0|224/275|ABC_membrane| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 29->312|2hydA2|4e-22|18.8|276/323|f.37.1.1| RP:SCP:REP 332->542|1sgwA|2e-29|19.5|195/200|c.37.1.12| HM:SCP:REP 13->330|2hydA2|1.1e-44|20.1|304/0|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 311->552|1pf4A1|1.8e-56|34.5|238/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 20105 OP:NHOMOORG 1170 OP:PATTERN 44519366BBBAA9EAE444461AE45AC6B68244434556256ABJ7ATLD2BHC8G6C9556--- 79H4N8GDIIJ97BA9A99-9B33DK999998CBBBITHI6HBRDIHDGB99EIF69G33HPFIN6HRRbBGBBBHEFN8fO552645AB67-835B--98G9B6JBH6F111111122233325BA7BI98DDBC9CCFD645N3PLJMIHD99AAD997ABHIBKabZG8D7A999B998797866SJ4CEOZZbYbUefRZebXZhWPTTRVdbjCHLXYMQSSTTOWcpLIIJJJHGIIIIIHHFLFFFZYESYbTCSNaTSEFccOGDDITNOQPOSaYSVTVWPXURPNRTNRPKMLKLLLMLMMLLTQRJIJOOQNRVUabcdcejeaMiLObYYGQPOiPPabLWPB2pkO98EKEBAPMSOBEC898888689879D3fURE9EEMEPIOPOQPNRMMPk-IGMGFNIJRoB5*oohnhe**tqnOC858KOYKJKMRNKAAAAAAAAF8A6DA9K44243333554655675677665564372966855BGF8HIJLMMKFHIIHIIPOJKJJFGHHKFBFA49DCCJD9C9FDMFPPCED5C49E556AAB99A76CA6CBM5D7FA8AJ98B48BAB97C896675FH6DCA87B7777675466665556769888EHDB95G6D9LBEHHDCFCGGHEEHFHEFF2-78CA6222222PIPTDMHFJJKGIJIFF-JFDEGFIFFHJIHDEEDDIPTSZaQQNIIFGHHHHHHKHIHGIRCBGHHHE83PXYXZZWVXXaX117546434BDEB44OBTHEEDGB9BDBBABBC68A986A57DHGBFFBGLFMDHJGF9LNN4444454347HNKQNLNNKUSRTV7CB788799A666622BABA454434313212*1M95749-4652675886449546112GDPEAJMMJG3A7 5666QLH-OB66RULGINHLOSPaRbNHHCECEPQNELKJHIHCBCQMOZTUcXIJRJJFFFGCB7892E95BADBB2AC7878GA69-QfCIKNIDCEHC9ERMG6Gid*XjVqbsMGIJKSIgpJwE**h2nSwHJHGYHN*XFLIJEVGC*GXOQbIf*JjQJKiOU*mepZ8EC9*69AGCfZc*HmuDIqcmmI ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-1,313-327,569-575| PSIPRED ccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEEccccccEEEEEEEEccccEEEEEccccccHHHHHHHHHHcccccccEEEEccEEHHHccHHHHHHHccEEccccccccccHHHHHHcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccEEEEccHHHcccHHHHHHHHHHHHHHHccccEEEEEccHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHHHccc //