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Lactobacillus salivarius UCC118 (lsal0)
Gene : cysS
DDBJ      :cysS         Cysteinyl-tRNA synthetase
Swiss-Prot:SYC_LACS1    RecName: Full=Cysteinyl-tRNA synthetase;         EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase;         Short=CysRS;

Homologs  Archaea  60/68 : Bacteria  906/915 : Eukaryota  190/199 : Viruses  1/175   --->[See Alignment]
a.27.1c.26.1
:470 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->468 1u0bB PDBj e-101 44.0 %
:RPS:PDB   2->261 3e4cB PDBj 4e-59 10.8 %
:RPS:PDB   300->466 3e98A PDBj 5e-24 11.5 %
:RPS:SCOP  1->318 1li5A2  c.26.1.1 * 3e-48 46.1 %
:RPS:SCOP  321->468 1u0bB1  a.27.1.1 * 9e-29 31.2 %
:HMM:SCOP  1->320 1li5A2 c.26.1.1 * 2.3e-98 35.4 %
:HMM:SCOP  321->469 1u0bB1 a.27.1.1 * 3.3e-35 33.8 %
:RPS:PFM   15->317 PF01406 * tRNA-synt_1e e-114 62.3 %
:HMM:PFM   15->318 PF01406 * tRNA-synt_1e 7.3e-133 54.0 298/301  
:HMM:PFM   357->418 PF09190 * DALR_2 3.9e-14 23.3 60/63  
:BLT:SWISS 1->470 SYC_LACS1 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00054.1 GT:GENE cysS GT:PRODUCT Cysteinyl-tRNA synthetase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1276159..1277571) GB:FROM 1276159 GB:TO 1277571 GB:DIRECTION - GB:GENE cysS GB:PRODUCT Cysteinyl-tRNA synthetase GB:NOTE COG0215 [J] Cysteinyl-tRNA synthetase GB:PROTEIN_ID ABE00054.1 GB:DB_XREF GI:90821415 GB:GENE:GENE cysS LENGTH 470 SQ:AASEQ MLQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFEVNYVSNFTDVDDKIIKASQEMNLSVKEITEKFINAFYEDTSALNVKKATLNPRVMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDIDQDKKQDPLDFALWKKVKQGEISWNSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDLEFPHHENEIAQSEAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLLKKVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKEVEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKVVEIFGISFSEEKELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDTAQGTRWKRND GT:EXON 1|1-470:0| SW:ID SYC_LACS1 SW:DE RecName: Full=Cysteinyl-tRNA synthetase; EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase; Short=CysRS; SW:GN Name=cysS; OrderedLocusNames=LSL_1247; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->470|SYC_LACS1|0.0|100.0|470/470| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 1->468|1u0bB|e-101|44.0|448/461| RP:PDB:NREP 2 RP:PDB:REP 2->261|3e4cB|4e-59|10.8|249/269| RP:PDB:REP 300->466|3e98A|5e-24|11.5|148/176| RP:PFM:NREP 1 RP:PFM:REP 15->317|PF01406|e-114|62.3|297/300|tRNA-synt_1e| HM:PFM:NREP 2 HM:PFM:REP 15->318|PF01406|7.3e-133|54.0|298/301|tRNA-synt_1e| HM:PFM:REP 357->418|PF09190|3.9e-14|23.3|60/63|DALR_2| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF01406|IPR015803| GO:PFM GO:0004817|"GO:cysteine-tRNA ligase activity"|PF01406|IPR015803| GO:PFM GO:0005524|"GO:ATP binding"|PF01406|IPR015803| GO:PFM GO:0005737|"GO:cytoplasm"|PF01406|IPR015803| GO:PFM GO:0006412|"GO:translation"|PF01406|IPR015803| GO:PFM GO:0006423|"GO:cysteinyl-tRNA aminoacylation"|PF01406|IPR015803| RP:SCP:NREP 2 RP:SCP:REP 1->318|1li5A2|3e-48|46.1|297/299|c.26.1.1| RP:SCP:REP 321->468|1u0bB1|9e-29|31.2|138/146|a.27.1.1| HM:SCP:REP 1->320|1li5A2|2.3e-98|35.4|314/315|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 321->469|1u0bB1|3.3e-35|33.8|136/0|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| OP:NHOMO 1443 OP:NHOMOORG 1157 OP:PATTERN 1111111111111111111111111111111111---11111211--1--111-11111111111111 1112222222232322222-22222222222222222222322322222221222222222231233222211111111111111111111111111--1111111111111111111111111111111111111222221112222111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122111111211111211111111111111111121111111111111111111123212111221111111111111111112231111111111111111111111111111111111111111111111111111111111-1111111111121111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111211111211111111111111111111111111111111111111111111-11111111111111111111111111111111 1111223-311111111111111111212111122111211111111111111111111111111111-21111121-1111111111-12112111111111111123242424222221222662427K5-323-22232232-21--41142322224513232222212333222K2321243241322322222 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 468 STR:RPRED 99.6 SQ:SECSTR cHHHHHHHGGGccccccTTTccEEEEEEEccccccccccccTTHHHHHHHHHHHHHTTEEEEEEEcccHHHHHHHHHHHcGGGGGcccEEEEEEEEEETTEEEcTTccTTcccEEcHHHHHHHHHHHHcTTTcGGGTTccEEEEEEEEcccHHHHHHHHHHcccccccccccHHHHHccccccEEEEEEcccccccccccccHccccHHHHHHHHHHHTTTccHHHHHHHHHHHTccccccccccEEEcccccccccccTTcEcEEcccccccTTTTccccHHHHHHHHcHHHHHHHHHcccTTccEEccHHHHHHHHTcccccHHHHHHHHHHHHHHcTTccccccHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHTTcccccccccccccccccccccccccccccccccHHGcHE## DISOP:02AL 464-466,468-471| PSIPRED cEEEEEcccccEEEEEEccccccEEEEEccEEcccccccccHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHHcccEEEEcccEEEEccccHHHHHHHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHcccccccEEEEccEEEEccccccHHHHccccccHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccEEEEcccccEEEEcc //