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Lactobacillus salivarius UCC118 (lsal0)
Gene : czcD
DDBJ      :czcD         Cobalt-zinc-cadmium resistance protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  163/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.52.9f.59.1
:341 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   108->316 2qfiA PDBj 7e-09 20.3 %
:RPS:PDB   251->323 3bypA PDBj 3e-10 19.2 %
:RPS:SCOP  45->249 2qfiA2  f.59.1.1 * 5e-16 16.9 %
:RPS:SCOP  252->323 2qfiA1  d.52.9.1 * 4e-11 20.8 %
:RPS:PFM   33->318 PF01545 * Cation_efflux 4e-17 27.8 %
:HMM:PFM   33->330 PF01545 * Cation_efflux 1.6e-77 31.0 277/285  
:BLT:SWISS 34->318 YEAB_BACSU 4e-29 29.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99032.1 GT:GENE czcD GT:PRODUCT Cobalt-zinc-cadmium resistance protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(270630..271655) GB:FROM 270630 GB:TO 271655 GB:DIRECTION - GB:GENE czcD GB:PRODUCT Cobalt-zinc-cadmium resistance protein GB:NOTE COG0053 [P] Predicted Co/Zn/Cd cation transporters GB:PROTEIN_ID ABD99032.1 GB:DB_XREF GI:90820393 GB:GENE:GENE czcD LENGTH 341 SQ:AASEQ MSKIKKHLQEEFEDWEREQLKQLHSLNAAWRHLILNVLAYLSISIIEYFLAEISNSQTLRADAFNNISGIVSTMLLMIGIHIARDIDDDDIAGMAPLPKLNMSQRENDQRVQFTRFRYETVFTLVTGVVMIGIAISVISTGIINLWKPDKRVIPEPIALVGAGIATVIMLIVWYLNRRAGRKLQNAALSASAQDSLSDAFTSIGTLISISGALIFKITWLDGATSILVGLFILYSGFKIFMDSSLNLVDYFDPEVEEEYRNVVLSVPGVAHLSELKAHYNGNIVSLDIVVMVDAKMSVLDSYRIAENIERIMHHRFGIMDTDVAFIPDPSSIDDDEIKDKF GT:EXON 1|1-341:0| BL:SWS:NREP 1 BL:SWS:REP 34->318|YEAB_BACSU|4e-29|29.7|263/290| TM:NTM 5 TM:REGION 31->53| TM:REGION 64->86| TM:REGION 121->143| TM:REGION 154->176| TM:REGION 207->229| SEG 78->93|igihiardiddddiag| SEG 186->199|aalsasaqdslsda| SEG 327->340|pdpssidddeikdk| BL:PDB:NREP 1 BL:PDB:REP 108->316|2qfiA|7e-09|20.3|207/286| RP:PDB:NREP 1 RP:PDB:REP 251->323|3bypA|3e-10|19.2|73/82| RP:PFM:NREP 1 RP:PFM:REP 33->318|PF01545|4e-17|27.8|259/282|Cation_efflux| HM:PFM:NREP 1 HM:PFM:REP 33->330|PF01545|1.6e-77|31.0|277/285|Cation_efflux| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF01545|IPR002524| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF01545|IPR002524| GO:PFM GO:0016020|"GO:membrane"|PF01545|IPR002524| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01545|IPR002524| RP:SCP:NREP 2 RP:SCP:REP 45->249|2qfiA2|5e-16|16.9|183/204|f.59.1.1| RP:SCP:REP 252->323|2qfiA1|4e-11|20.8|72/82|d.52.9.1| OP:NHOMO 190 OP:NHOMOORG 172 OP:PATTERN --------------------------------------11111-------2-2--1------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------121111111121111111-111211111111111111111211111111111111111111--1-11-----22--22-1--1-1111111111111111111111111111-1111111111-1111111---11222222212111--111111---------------1--1-------------------------1---------------------------------------------------------------------1------------------------------------------1--1-1----------------1----------------1----------------------------1-------------1----1--------1------------------------1-------1---1------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------11111-1-----------------1-----------------1-1-------------------------------------- -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 214 STR:RPRED 62.8 SQ:SECSTR ###########################################################################################################cTTccccccTHHHHHHHTTTTTTcccTTGGGcccTTccTTTccccTTT#ccccccGGGcccGGGGTTTHHHHGGGcccTTcGGGGGGHHHHTccc#cTTcccTTcccccTTccccccHHHHTTTTTTTTTTHHHHTGGGccccccHHHHHHHHHHHHHTTTccEEEEEEEEEETTEEEEEEEEEEcTTccHHHHHHHHHHHHHHHHHHcTTEEEEE################## DISOP:02AL 1-5,14-28,181-193,335-336,340-342| PSIPRED ccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEccccccccHHHHHHcc //