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Lactobacillus salivarius UCC118 (lsal0)
Gene : ddpX
DDBJ      :ddpX         D-alanyl-D-alanine dipeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  166/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.65.1
:187 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->166 1r44A PDBj 4e-12 32.5 %
:RPS:SCOP  7->167 1r44A  d.65.1.4 * 2e-30 32.9 %
:HMM:SCOP  4->185 1r44A_ d.65.1.4 * 2.6e-42 37.2 %
:RPS:PFM   10->166 PF01427 * Peptidase_M15 5e-34 46.8 %
:HMM:PFM   6->170 PF01427 * Peptidase_M15 3.6e-36 36.4 165/198  
:BLT:SWISS 6->180 DDPX_ECOLI 4e-29 36.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00178.1 GT:GENE ddpX GT:PRODUCT D-alanyl-D-alanine dipeptidase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1443201..1443764) GB:FROM 1443201 GB:TO 1443764 GB:DIRECTION - GB:GENE ddpX GB:PRODUCT D-alanyl-D-alanine dipeptidase GB:NOTE COG2173 [M] D-alanyl-D-alanine dipeptidase GB:PROTEIN_ID ABE00178.1 GB:DB_XREF GI:90821539 GB:GENE:GENE ddpX LENGTH 187 SQ:AASEQ MDKKLTGFTNIQKLDPDIIVDLKYATEDNFTGKVTYDFTTAIARTGTAYKLAKASEIVKKQGYRLKVWDAYRPVKSQKRLFEVYPDPKFVAEPNPNFSHQKGVTFDLTLTDKLGNEVEMQTGFDDFSEIAARKAPRTPEQEKNYKILNDAMLEAGFVGYENEWWDYRDSQMDEYEPLDADPNEYKLK GT:EXON 1|1-187:0| BL:SWS:NREP 1 BL:SWS:REP 6->180|DDPX_ECOLI|4e-29|36.2|174/193| BL:PDB:NREP 1 BL:PDB:REP 7->166|1r44A|4e-12|32.5|160/202| RP:PFM:NREP 1 RP:PFM:REP 10->166|PF01427|5e-34|46.8|154/192|Peptidase_M15| HM:PFM:NREP 1 HM:PFM:REP 6->170|PF01427|3.6e-36|36.4|165/198|Peptidase_M15| GO:PFM:NREP 4 GO:PFM GO:0005618|"GO:cell wall"|PF01427|IPR000755| GO:PFM GO:0006508|"GO:proteolysis"|PF01427|IPR000755| GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF01427|IPR000755| GO:PFM GO:0016805|"GO:dipeptidase activity"|PF01427|IPR000755| RP:SCP:NREP 1 RP:SCP:REP 7->167|1r44A|2e-30|32.9|161/202|d.65.1.4| HM:SCP:REP 4->185|1r44A_|2.6e-42|37.2|180/202|d.65.1.4|1/1|Hedgehog/DD-peptidase| OP:NHOMO 169 OP:NHOMOORG 168 OP:PATTERN -------------------------------------------------------------------- -11-1---------11111-11--111111111111--------------------------------1------------1------1111--11----111111-1-1------------------11----1--------------------11---------1-----------------------1-----------------------------11-------------------------------1-1--------11-----1-1---------------------------------------------------------------------------------111--1--------------1111--------1------1-1-------------11-11-1---------------------------------------------111------------------1---------------------111111-111111111111-1112---------------1---1-------1--------------1--------1----1-------------1--1------------1---------------------------------------------------------1-----1111-1---11-11111--1111-111111---------1-111111-1111111111---11-----------------------11111---1--------------------------------1-----------------------------------1111111111--------11----------------------------------------------------1 ----11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 160 STR:RPRED 85.6 SQ:SECSTR ######TEEEGGGTcTTcEEccGGGccccTTccccccccccEEEHHHHHHHHHHHHHTTcccEEEEEEEccccHHHHHHHHHTcccccccHHcccccGGGGTcEEEEEEEETTcccccccccTTcccGGGcTTccccHHHHHHHHHHHHHHHTTTEEEcTTcTTEE##################### DISOP:02AL 1-2,93-97,187-188| PSIPRED ccccccccEEEHHccccEEEEEEEEccccccccccccccEEEEcHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHcccccEEccccccccccccEEEEEEEEEccccEEccccccccccHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHccccccccccEEcc //