[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : dnaB.1
DDBJ      :dnaB         Chromosome replication initiation / membrane attachment protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  115/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.39.1
:448 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  59->256 1ij5A  a.39.1.9 * 1e-04 26.7 %
:HMM:PFM   308->385 PF07261 * DnaB_2 5.6e-13 28.4 74/77  
:HMM:PFM   65->109 PF01978 * TrmB 0.00097 25.0 40/68  
:HMM:PFM   377->442 PF08164 * TRAUB 0.001 28.3 60/83  
:BLT:SWISS 10->434 DNAB_BACSU 1e-29 25.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99301.1 GT:GENE dnaB.1 GT:PRODUCT Chromosome replication initiation / membrane attachment protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 541166..542512 GB:FROM 541166 GB:TO 542512 GB:DIRECTION + GB:GENE dnaB GB:PRODUCT Chromosome replication initiation / membrane attachment protein GB:NOTE COG3611 [L] Replication initiation/membrane attachment protein GB:PROTEIN_ID ABD99301.1 GB:DB_XREF GI:90820662 GB:GENE:GENE dnaB LENGTH 448 SQ:AASEQ MDSALNKLSPKDGYLVSASTYIDNHDIEIVQVLYQPIIGIVAVALYSYLRFEIDSKLILSERKLNKNIIDGLGISIPELYDARLKLEATGLIKTFEGEDKLGKYHIYELQKPLNEVKFFTDDLLSTALLEMVGNEKFKKLSLWNKFDNNYHDKKEVTKQFFDVFNLNKDNIVLQAQLNNSKISNDESLINRQKVSLDMTVFSDFIKNSYVSSDDVMNHLDIIKSVKLVYGIDEFQLVKLLEKAINVTNNKIDYNEFKKLAQKNFDSGIRRNFKKNKIVETAKAKDDEKDKNIDPLVNAFKAYVPLEFLEILKNELGSFVTANERYAVKTLVEKQMLPNEVINVLIHYLLVVQDSSTILKGTFERIAADWTKKKIKNAQEAMTYVKSFTREKSLQRKATKKDSKGRKSNVIVKEKLPEWAKEKGKNKLTDVGKKENKEIDELLKKINGK GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 10->434|DNAB_BACSU|1e-29|25.7|417/472| SEG 282->293|kakddekdknid| HM:PFM:NREP 3 HM:PFM:REP 308->385|PF07261|5.6e-13|28.4|74/77|DnaB_2| HM:PFM:REP 65->109|PF01978|0.00097|25.0|40/68|TrmB| HM:PFM:REP 377->442|PF08164|0.001|28.3|60/83|TRAUB| RP:SCP:NREP 1 RP:SCP:REP 59->256|1ij5A|1e-04|26.7|176/305|a.39.1.9| OP:NHOMO 115 OP:NHOMOORG 115 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111-----11-----------1111111111111---111---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111------------1----1---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3,261-289,387-413,418-441,446-449| PSIPRED cccHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcHHHHHHHHHcccccccHHHHcccccccccHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHccHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHHHHHcc //