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Lactobacillus salivarius UCC118 (lsal0)
Gene : dnaB.2
DDBJ      :dnaB         Replicative DNA helicase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  909/915 : Eukaryota  6/199 : Viruses  18/175   --->[See Alignment]
a.81.1c.37.1
:463 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   10->455 2r6aA PDBj e-141 62.3 %
:RPS:PDB   11->112 1b79A PDBj 3e-34 47.1 %
:RPS:PDB   147->451 3cmxA PDBj 4e-38 13.6 %
:RPS:SCOP  11->112 1b79A  a.81.1.1 * 1e-34 47.1 %
:RPS:SCOP  183->403 1n0wA  c.37.1.11 * 3e-28 15.2 %
:HMM:SCOP  8->121 1jweA_ a.81.1.1 * 2e-39 48.2 %
:HMM:SCOP  147->445 1g19A1 c.37.1.11 * 2.3e-52 32.5 %
:RPS:PFM   12->112 PF00772 * DnaB 3e-28 53.5 %
:RPS:PFM   187->368 PF03796 * DnaB_C 2e-58 60.8 %
:HMM:PFM   186->369 PF03796 * DnaB_C 6e-78 59.6 183/185  
:HMM:PFM   11->112 PF00772 * DnaB 3.3e-39 50.0 102/103  
:BLT:SWISS 4->455 DNAC_BACSU e-151 62.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00528.1 GT:GENE dnaB.2 GT:PRODUCT Replicative DNA helicase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1807560..1808951) GB:FROM 1807560 GB:TO 1808951 GB:DIRECTION - GB:GENE dnaB GB:PRODUCT Replicative DNA helicase GB:NOTE COG0305 [L] Replicative DNA helicase GB:PROTEIN_ID ABE00528.1 GB:DB_XREF GI:90821889 GB:GENE:GENE dnaB LENGTH 463 SQ:AASEQ MNNDIMTDNLPPQNIEAEQAVLGAIFLNTDALADAMEYVEPDDFYRRAHQILFQAMVDLNNDGEAIDVLTVQNYLTTNNQLDDVGGVAYIAELATSVPTAANAGYYAKIVEEKSMLRRLISTATNIITQANNGDDDVPSLLDSAERQIMDVSERRNRSGFREIKDVLNETLSDIDRLSQQSEDITGLPTGYREFDKMTAGLQPDNLIILAARPAVGKTAFALNIAQNVATSTDTSVAIFSLEMSAESLVNRMLCAEGSINANHLRTGQLDEGEWQNLIVAMGALSNTSIFIDDTPGIKMAEIRAKCRRLAKEKGNLGLVVIDYLQLIEGSNKESRQQEVSEISRQLKKLAKELSVPILALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYERGESKSEEDGDDQDSLNQDVGEVELIIEKNRAGARGTVKLLFIKSYNKFSNISYAQEPPM GT:EXON 1|1-463:0| BL:SWS:NREP 1 BL:SWS:REP 4->455|DNAC_BACSU|e-151|62.9|437/454| BL:PDB:NREP 1 BL:PDB:REP 10->455|2r6aA|e-141|62.3|419/420| RP:PDB:NREP 2 RP:PDB:REP 11->112|1b79A|3e-34|47.1|102/102| RP:PDB:REP 147->451|3cmxA|4e-38|13.6|264/1603| RP:PFM:NREP 2 RP:PFM:REP 12->112|PF00772|3e-28|53.5|101/103|DnaB| RP:PFM:REP 187->368|PF03796|2e-58|60.8|181/184|DnaB_C| HM:PFM:NREP 2 HM:PFM:REP 186->369|PF03796|6e-78|59.6|183/185|DnaB_C| HM:PFM:REP 11->112|PF00772|3.3e-39|50.0|102/103|DnaB| GO:PFM:NREP 6 GO:PFM GO:0003678|"GO:DNA helicase activity"|PF00772|IPR007693| GO:PFM GO:0005524|"GO:ATP binding"|PF00772|IPR007693| GO:PFM GO:0006260|"GO:DNA replication"|PF00772|IPR007693| GO:PFM GO:0003678|"GO:DNA helicase activity"|PF03796|IPR007694| GO:PFM GO:0005524|"GO:ATP binding"|PF03796|IPR007694| GO:PFM GO:0006260|"GO:DNA replication"|PF03796|IPR007694| RP:SCP:NREP 2 RP:SCP:REP 11->112|1b79A|1e-34|47.1|102/102|a.81.1.1| RP:SCP:REP 183->403|1n0wA|3e-28|15.2|204/210|c.37.1.11| HM:SCP:REP 8->121|1jweA_|2e-39|48.2|114/114|a.81.1.1|1/1|N-terminal domain of DnaB helicase| HM:SCP:REP 147->445|1g19A1|2.3e-52|32.5|246/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1186 OP:NHOMOORG 933 OP:PATTERN -------------------------------------------------------------------- 1111211111211111111-12111111111112121111111111113111111111111111111111111111111111111111112122111-11111111111121221111221111111111111111111111111112111111111111111211132311111111111211111111111222222132123425211111122311211111111113211111122211111111111112111111111111111121111112111111111111111111111222111111111121111111121111111112122112431121111111111111211111111112111111111115113111111111111111111111112-112214212111111111111111211111111111111111111111112111111111111112Q11111111111111111111111111111111112111111111111111411111112211412131111111121111232211111112111221111114111122112111111111111111-111111111111111111111111111111111111111111111111111111111111111111112113211211121232121131211122211111121112113323122112212212213111223211211111111311111111111111111111111121221--132131122121111112221211121131112111111111111141111111111111121112211111111111111422111111115D921112122111111111111111112111111112 -------------2-----------------------------------------------------------------------------------------------------------------------------------------------------1---------1-1------------3-----1---- ---------1-------------------1-----------------------1-----11---------------------------------1--1-------1-----1-------------------------1---1-11--1-----2-11--------1--------- DISOP:02AL 1-2,129-137,152-160,179-182,328-340,365-377,409-414,457-464| PSIPRED ccccHHHcccccccHHHHHHHHHHHHHcHHHHHHHHHHHcHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHcccccEEEEccEEEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHcccHHHHHHHcEEEEEEEHHHHcccccHHHHHHHccccccccccEEEEEEEEcccccEEEEEEEEEcccccHHcccccccccc //