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Lactobacillus salivarius UCC118 (lsal0)
Gene : eriC
DDBJ      :eriC         Chloride channel protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  223/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
d.286.1f.20.1
:512 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->422 1kplB PDBj 1e-15 31.4 %
:BLT:PDB   434->486 3jxoB PDBj 3e-05 35.8 %
:RPS:PDB   69->137 3ejzA PDBj 3e-22 33.3 %
:RPS:PDB   377->501 2bkoA PDBj 7e-11 12.8 %
:RPS:SCOP  52->426 1kpkA  f.20.1.1 * 2e-51 21.5 %
:RPS:SCOP  435->501 1vctA2  d.286.1.1 * 1e-09 19.4 %
:HMM:SCOP  1->428 1kpkA_ f.20.1.1 * 1.6e-96 35.7 %
:HMM:SCOP  413->502 2fy8A2 d.286.1.1 * 1.6e-11 28.1 %
:RPS:PFM   75->404 PF00654 * Voltage_CLC 2e-23 27.5 %
:RPS:PFM   434->486 PF02080 * TrkA_C 1e-04 39.6 %
:HMM:PFM   71->404 PF00654 * Voltage_CLC 1.5e-89 37.2 333/355  
:HMM:PFM   435->500 PF02080 * TrkA_C 3.6e-13 34.8 66/71  
:HMM:PFM   50->75 PF07664 * FeoB_C 5.4e-05 30.8 26/54  
:BLT:SWISS 43->421 CLCA_VIBPA 5e-23 34.2 %
:BLT:SWISS 432->486 TRKA_ARCFU 3e-05 32.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99966.1 GT:GENE eriC GT:PRODUCT Chloride channel protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1190534..1192072) GB:FROM 1190534 GB:TO 1192072 GB:DIRECTION - GB:GENE eriC GB:PRODUCT Chloride channel protein GB:NOTE COG0038 [P] Chloride channel protein EriC GB:PROTEIN_ID ABD99966.1 GB:DB_XREF GI:90821327 GB:GENE:GENE eriC LENGTH 512 SQ:AASEQ MKFDTSRFIFIVKGLLVGAAVGIVVSLFRLLIEKFLVLINFLFMQAHNNSIYFIILAIIMLVSLIANSKFIKDEPNIKGSGIPQVEGQLAGELEMNWWSVLWRKWVGGILSIGIGLFLGREGPSIQLGAAVGQGIAERTNHRGSGRRILIAGGASAGLSAAFNAPIASTLFILEEVYHNFSPLVWTTSLAAAIAANFVSLNFFGLTPVLHMSYKLAFPIHYYIHLVLLGIFLGLLGYVYQYLTLNIDRFYKLFKFIPSNWLAIIPIILLFPLGYFLPDTLGGGNSLILEIGGNIPTVWLLLGIFLLRLLFSTLSYGSGLPGGIFLPILTIGATLGALYGVVAAHFGLLPDKYIVDCIIYAMAGYFACIGKAPFTAILLITEMVGSLHHLMPLAVVSLTAYTVVDLLRGRPIYEALLEKSLKRYTPHPDEFTDQLEIPVFAGSYLQDKQVRDITWPKECLLVAIQRGEKQTIPHGDTLIRSGDTLVIETGDAHRAEVARKIGHIANDISNWKN GT:EXON 1|1-512:0| BL:SWS:NREP 2 BL:SWS:REP 43->421|CLCA_VIBPA|5e-23|34.2|377/467| BL:SWS:REP 432->486|TRKA_ARCFU|3e-05|32.7|55/436| TM:NTM 11 TM:REGION 14->36| TM:REGION 49->71| TM:REGION 105->127| TM:REGION 151->173| TM:REGION 184->206| TM:REGION 216->238| TM:REGION 255->277| TM:REGION 288->310| TM:REGION 322->344| TM:REGION 357->379| TM:REGION 386->407| SEG 11->25|ivkgllvgaavgivv| SEG 107->119|ggilsigiglflg| SEG 145->161|grriliaggasaglsaa| SEG 225->236|lvllgiflgllg| SEG 263->277|iipiillfplgyflp| SEG 299->313|lllgifllrllfstl| BL:PDB:NREP 2 BL:PDB:REP 53->422|1kplB|1e-15|31.4|363/451| BL:PDB:REP 434->486|3jxoB|3e-05|35.8|53/85| RP:PDB:NREP 2 RP:PDB:REP 69->137|3ejzA|3e-22|33.3|66/444| RP:PDB:REP 377->501|2bkoA|7e-11|12.8|125/190| RP:PFM:NREP 2 RP:PFM:REP 75->404|PF00654|2e-23|27.5|327/351|Voltage_CLC| RP:PFM:REP 434->486|PF02080|1e-04|39.6|53/71|TrkA_C| HM:PFM:NREP 3 HM:PFM:REP 71->404|PF00654|1.5e-89|37.2|333/355|Voltage_CLC| HM:PFM:REP 435->500|PF02080|3.6e-13|34.8|66/71|TrkA_C| HM:PFM:REP 50->75|PF07664|5.4e-05|30.8|26/54|FeoB_C| GO:PFM:NREP 6 GO:PFM GO:0005247|"GO:voltage-gated chloride channel activity"|PF00654|IPR001807| GO:PFM GO:0006821|"GO:chloride transport"|PF00654|IPR001807| GO:PFM GO:0016020|"GO:membrane"|PF00654|IPR001807| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00654|IPR001807| GO:PFM GO:0006813|"GO:potassium ion transport"|PF02080|IPR006037| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF02080|IPR006037| RP:SCP:NREP 2 RP:SCP:REP 52->426|1kpkA|2e-51|21.5|372/450|f.20.1.1| RP:SCP:REP 435->501|1vctA2|1e-09|19.4|67/94|d.286.1.1| HM:SCP:REP 1->428|1kpkA_|1.6e-96|35.7|428/450|f.20.1.1|1/1|Clc chloride channel| HM:SCP:REP 413->502|2fy8A2|1.6e-11|28.1|89/0|d.286.1.1|1/1|TrkA C-terminal domain-like| OP:NHOMO 311 OP:NHOMOORG 257 OP:PATTERN -------1------------------------1--------------------------1-------- 11----------1----------------------------------------------------------1---1111---------1111-1------------------------------------------1-----------1------11------12--111---1-------------------------------------------------------------------------------1211121121311222111121-11111111111--1111111111111111111111111111121111----1-----------1111222-1-11--------1-----1---1111-------------1-11---1--------------1-22-22-1-1---1111----2---11-----1---------------1---1-------------------------------------------1----1--------------1--------1--------------------------------------1-1---1-----1--------------------------------------------11------1-1---------------------------------11----1111111111-1111111111111111111111----1----------------11111111--111111111111--------------------------------------------------------------111111111-11111111111111--------------1-----------------1---------------------------1-----1----2- ---------------------------------------------------------------------------------------------------------------1-1223-----1-22-119C2-12511--1--1--1-121112121-1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 449 STR:RPRED 87.7 SQ:SECSTR #################################################HHHHHHHHHHHHHHHHHHHHHc##cGGGccccHHHHHHHHHTcccccHHHHHHHHHHHHHHHTTTTcccccHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHcHHHHTTccHHHHHHHHHHHHHHHHHHHcccccccccccccccTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHccGccccTTTHHHTTTcc#cHHHHHHHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHHHcGGGcccHHHHHHHHHTHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHcccEEEEEEccTTcTTTTccHHHHTHHHHcEEEEEEETTEEEcccTTccccTTcEEEEEEcHHHHHHHHHHHT########### DISOP:02AL 1-1,424-430,506-506,509-509,511-513| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccEEccEEEEEcccccccEEEEEEEcccEEccccccccccccEEEEEccHHHHHHHHHHHHcccHHHHHccc //