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Lactobacillus salivarius UCC118 (lsal0)
Gene : fabD
DDBJ      :fabD         Malonyl-CoA-[acyl-carrier-protein] transacylase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  817/915 : Eukaryota  145/199 : Viruses  0/175   --->[See Alignment]
c.19.1
:312 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->307 3eenA PDBj 8e-31 29.2 %
:RPS:PDB   2->296 2c2nA PDBj 1e-62 24.6 %
:RPS:SCOP  3->259 1nm2A1  c.19.1.1 * 1e-44 16.9 %
:HMM:SCOP  2->305 1mlaA1 c.19.1.1 * 1.8e-47 33.3 %
:RPS:PFM   4->293 PF00698 * Acyl_transf_1 3e-28 31.2 %
:HMM:PFM   6->288 PF00698 * Acyl_transf_1 8.4e-36 24.6 272/318  
:BLT:SWISS 2->310 FABD_BACSU 2e-41 34.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99263.1 GT:GENE fabD GT:PRODUCT Malonyl-CoA-[acyl-carrier-protein] transacylase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 500912..501850 GB:FROM 500912 GB:TO 501850 GB:DIRECTION + GB:GENE fabD GB:PRODUCT Malonyl-CoA-[acyl-carrier-protein] transacylase GB:NOTE COG0331 [I] (acyl-carrier-protein) S-malonyltransferase GB:PROTEIN_ID ABD99263.1 GB:DB_XREF GI:90820624 GB:GENE:GENE fabD LENGTH 312 SQ:AASEQ MKLAILFSGQGSQFTDMGLDFYQESPIFKDCVDKASEIADFKITSVFANDGDKLSETKYIQPAIVAMSIGIWKMLQNTLGDKLAVEGMVGLSLGEYSALIASQKLSFSDGMSVLKDRAIYMQDDANKVDSKMAAIIDPQIEVIEKLCTDYPNVYVANYNTPKQLVIGGDGEELVDVVDKIDSLNAAKKIVELKVSGAFHTPLFTNASQKMKKRLSNVTFAEGSNLVVSNTTMRPFEKDSLAEILAKQIIKPTHFGECVQYLIDNKKIDTVLEIGPGKTLSKFTKQIDKSIKRYHISKLSDFKKFIDSVKESE GT:EXON 1|1-312:0| BL:SWS:NREP 1 BL:SWS:REP 2->310|FABD_BACSU|2e-41|34.5|304/317| BL:PDB:NREP 1 BL:PDB:REP 3->307|3eenA|8e-31|29.2|301/314| RP:PDB:NREP 1 RP:PDB:REP 2->296|2c2nA|1e-62|24.6|293/317| RP:PFM:NREP 1 RP:PFM:REP 4->293|PF00698|3e-28|31.2|279/297|Acyl_transf_1| HM:PFM:NREP 1 HM:PFM:REP 6->288|PF00698|8.4e-36|24.6|272/318|Acyl_transf_1| RP:SCP:NREP 1 RP:SCP:REP 3->259|1nm2A1|1e-44|16.9|236/243|c.19.1.1| HM:SCP:REP 2->305|1mlaA1|1.8e-47|33.3|234/0|c.19.1.1|1/1|FabD/lysophospholipase-like| OP:NHOMO 1694 OP:NHOMOORG 962 OP:PATTERN -------------------------------------------------------------------- 22316--1--1---33266-65229265666295451222-644--------111--11153--8-5G5B---------111111111111111111--11111141112111111111111111111111111111112211192263244811111111112114A9M311111111111111111111117111111112111111111144112111211111111131111111111111111111111-111111-1-1111111111111111111111122111111111111111111111111111111111111122111111111171441111112--11111112111111111111111221--11111121111111-411-11111111111-22323-21211123351111-111131112-111111111111111111111211111111111111111111111111111111111111----1112135333211224444161111111111121111122112212111111111111112111-11321111321111-12222114121111B511111111111111111111111111111111-122111322222322222222222221-11111111---71311211113145211-2111112122222111111213324331211111111111111111111111123333323323211112222221121151111111111111111122222112113211111322111111424211111111111131111111211211111111111111111--------------1-1-------------------------1111111111111 1132bk1-1---11113215244667811-11164312121331125333715244354333111-------1-1------111-111---13-11------1111--3-I31312-1---11111-1-121-1-11-1-1-111--1--1--311-111111321--11432221112G22222113242111-1113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 310 STR:RPRED 99.4 SQ:SECSTR EcEEEEEccTTcccTTTTTTTTHTcTTHHHHHHHHHHHHcccHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHTEEEEEEcTTHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHTccEEEEEEEccTTccHHHHHcccccEEEEEEEETTEEEEEEEHHHHHHHHHTGGGGTHccEEEEccccccTTcGGGGGGHHHHHHHHHTccccccccEEEcTTTccccccGGGHHHHHHHTTccEEHHHHHHHHTccccccEEEEEccccHHHHHHHHHcHHHHTTEEEcHHHHHHHHHHHcH## DISOP:02AL 312-313| PSIPRED cEEEEEEccccccHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHcccccEEEEEEcccccEEEEccHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccEEEcccccccccHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEcccHHHHHHHHHHHHHcc //