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Lactobacillus salivarius UCC118 (lsal0)
Gene : fabH.1
DDBJ      :fabH         3-oxoacyl-[acyl-carrier-protein] synthase III
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  824/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->305 3il5A PDBj 5e-72 48.8 %
:RPS:PDB   12->318 1b65A PDBj 9e-46 7.6 %
:RPS:SCOP  6->171 1eblA1  c.95.1.2 * 3e-49 35.5 %
:RPS:SCOP  214->326 1u0mA2  c.95.1.2 * 3e-28 21.2 %
:HMM:SCOP  1->326 1tedA_ c.95.1.2 * 3.8e-52 27.4 %
:RPS:PFM   106->171 PF08545 * ACP_syn_III 4e-19 51.5 %
:RPS:PFM   238->325 PF08541 * ACP_syn_III_C 5e-22 52.3 %
:HMM:PFM   238->326 PF08541 * ACP_syn_III_C 1.3e-34 52.8 89/90  
:HMM:PFM   106->183 PF08545 * ACP_syn_III 6.4e-28 44.9 78/80  
:HMM:PFM   47->81 PF10051 * DUF2286 0.0001 36.4 33/141  
:BLT:SWISS 1->326 FABH_LACRJ 2e-96 54.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99261.1 GT:GENE fabH.1 GT:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase III GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 499656..500636 GB:FROM 499656 GB:TO 500636 GB:DIRECTION + GB:GENE fabH GB:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase III GB:NOTE COG0332 [I] 3-oxoacyl-[acyl-carrier-protein] synthase III GB:PROTEIN_ID ABD99261.1 GB:DB_XREF GI:90820622 GB:GENE:GENE fabH LENGTH 326 SQ:AASEQ MENIEISYTARYVPPEVIDNQRLTEFMDTSDEWISQRTGIKKRHISLNESTADLAKKVAEKLLTKSGWNPNSLDLIIVATMSPNSFTPATAAIVQGRISADNAVCFDISAACSGYIYGLSIVEAMLRNMNLKRAMLIGSENLSKLIDWNDRSTAVLFGDGAAGALIELKEDTDSKFISSDLKTIGNEAEFLTAGITDPLEKFPDLDSIRKYTTFKMDGRRVYTFATREVPQSILRAVQKANLSLEDIDYFILHQANSRIIRQVAKKLKQDEEKFPINIDSFGNTSAASEPLLLDELIENGTVKRGMTLALSGFGGGLTVGTHIIKY GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 1->326|FABH_LACRJ|2e-96|54.6|324/324| BL:PDB:NREP 1 BL:PDB:REP 6->305|3il5A|5e-72|48.8|291/320| RP:PDB:NREP 1 RP:PDB:REP 12->318|1b65A|9e-46|7.6|290/363| RP:PFM:NREP 2 RP:PFM:REP 106->171|PF08545|4e-19|51.5|66/79|ACP_syn_III| RP:PFM:REP 238->325|PF08541|5e-22|52.3|88/90|ACP_syn_III_C| HM:PFM:NREP 3 HM:PFM:REP 238->326|PF08541|1.3e-34|52.8|89/90|ACP_syn_III_C| HM:PFM:REP 106->183|PF08545|6.4e-28|44.9|78/80|ACP_syn_III| HM:PFM:REP 47->81|PF10051|0.0001|36.4|33/141|DUF2286| GO:PFM:NREP 4 GO:PFM GO:0004315|"GO:3-oxoacyl-[acyl-carrier-protein] synthase activity"|PF08545|IPR013751| GO:PFM GO:0006633|"GO:fatty acid biosynthetic process"|PF08545|IPR013751| GO:PFM GO:0008610|"GO:lipid biosynthetic process"|PF08541|IPR013747| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF08541|IPR013747| RP:SCP:NREP 2 RP:SCP:REP 6->171|1eblA1|3e-49|35.5|166/174|c.95.1.2| RP:SCP:REP 214->326|1u0mA2|3e-28|21.2|113/148|c.95.1.2| HM:SCP:REP 1->326|1tedA_|3.8e-52|27.4|299/0|c.95.1.2|1/1|Thiolase-like| OP:NHOMO 1304 OP:NHOMOORG 847 OP:PATTERN -------------------------------------------------------------------- 11314---------32211-11--22111112111152221333112111111211121121112235631--------11-111111422114112--225344135141111111111111112111111121111111---2111111111111111112111111311111111111111121111-112444442253423222132212342111111111111132111111111111111121111-111111-1-2211111222211111111111111111111111111111111111111211111111111122222222222241223111-23--1111111111113111131122212222211111221111122222222222222222-33133112232222211121111112233122111122211111111111111111111111111--11111111211111111-2112121111411214333331131444432213111111222111112112111131212311111111111111243111111121111222422222222234221111122212311111111111111113311211221132222532222242222251-11111------12211111112111111-1111121111111111112111221211111111111111111211111111-1121222122221111222213444113111111111111111111111111111--44442425122221342111111111111122222232232113232222311111113--1111--------1-1-------------------------11----2---121 1-------1----1----------------------------------------------------------------------------------------------41----------------------------------------------------1-------------111A111115115-11-1----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 325 STR:RPRED 99.7 SQ:SECSTR #ccEEEEEEEEcccccccTTccGGGcTTcEEEEEEEEcccccTTccccEEEEEEEETTTTccccccEEEEEEEEEEccccccHccHHHHHHcEEcccEEEEEGGGHHHcHHHHHHHHHHHHTHHHHccccccccccEEEEEccTTccGGGccccHHHHHHHHHTcccccccccccEETTEEcEEEEEEEEEEETEEEEEEEEEETEccccGGGcccTTccHHHHccTTcHHHHHHHHHHHTccGGHccEEEEEEEcccccHHHHHHHHHTHHHHHHTTTccccTTcEEEEEEEEcccccccGGccccccccccccGGGEEEEEEEc DISOP:02AL 1-1| PSIPRED cccEEEEEEEEEcccccccHHHHHHHHcccHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHccccHHHccEEEEEccccccccccHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccEEEccccEEEEEEEccccccccEEEEEEEEccccccEEEcccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEEEEEEccccEEEEEEEc //