[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : fabH.2
DDBJ      :fabH         3-oxoacyl-[acyl-carrier-protein] synthase III
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  823/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->324 2ebdB PDBj 2e-61 38.4 %
:RPS:PDB   5->315 1b65A PDBj 5e-40 6.7 %
:RPS:SCOP  6->172 1eblA1  c.95.1.2 * 3e-56 38.3 %
:RPS:SCOP  214->325 1u0mA2  c.95.1.2 * 2e-19 23.2 %
:HMM:SCOP  1->175 1u0vA1 c.95.1.2 * 3e-49 38.5 %
:HMM:SCOP  158->324 1ee0A2 c.95.1.2 * 7.3e-25 34.0 %
:RPS:PFM   107->172 PF08545 * ACP_syn_III 4e-17 50.0 %
:RPS:PFM   246->322 PF08541 * ACP_syn_III_C 7e-13 41.6 %
:HMM:PFM   107->177 PF08545 * ACP_syn_III 1.8e-28 47.9 71/80  
:HMM:PFM   237->323 PF08541 * ACP_syn_III_C 1.2e-23 40.2 87/90  
:HMM:PFM   198->254 PF01043 * SecA_PP_bind 0.00079 27.8 36/113  
:HMM:PFM   4->82 PF01154 * HMG_CoA_synt_N 0.00057 31.2 77/174  
:BLT:SWISS 6->323 FABH1_LACPL 9e-92 50.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00064.1 GT:GENE fabH.2 GT:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase III GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1286694..1287674) GB:FROM 1286694 GB:TO 1287674 GB:DIRECTION - GB:GENE fabH GB:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase III GB:NOTE COG0332 [I] 3-oxoacyl-[acyl-carrier-protein] synthase III GB:PROTEIN_ID ABE00064.1 GB:DB_XREF GI:90821425 GB:GENE:GENE fabH LENGTH 326 SQ:AASEQ MNKGIKMVSIAGYLPGNVVTNDDLSKIMETSDEWIQSHTGIKQRYYAFNENTSDLATEVGKKLLERANLKSEDIDLLIVSTISPDAITPSTAAIVEKKLNLKSAFAFDISAACAGFIYALSTAHKFLVSGLYRRAMVISAETNSKMMDFKDRTSAVFFGDGAAGMIVEATDDEKENIYLSEKLVTVGNEEVIHSGRIAPLKEISSDNYPSMDAFYQNGREVYNFVTTDIVKHIKEFLETNKVNSKDLSYVVTHQANLRLIEIISKEIEVPLNRVATDVKECGNISSVGIPLALARKFEDENITGKVLLTGFGAGLAYGSILLEFGE GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 6->323|FABH1_LACPL|9e-92|50.6|316/323| BL:PDB:NREP 1 BL:PDB:REP 4->324|2ebdB|2e-61|38.4|305/308| RP:PDB:NREP 1 RP:PDB:REP 5->315|1b65A|5e-40|6.7|300/363| RP:PFM:NREP 2 RP:PFM:REP 107->172|PF08545|4e-17|50.0|66/79|ACP_syn_III| RP:PFM:REP 246->322|PF08541|7e-13|41.6|77/90|ACP_syn_III_C| HM:PFM:NREP 4 HM:PFM:REP 107->177|PF08545|1.8e-28|47.9|71/80|ACP_syn_III| HM:PFM:REP 237->323|PF08541|1.2e-23|40.2|87/90|ACP_syn_III_C| HM:PFM:REP 198->254|PF01043|0.00079|27.8|36/113|SecA_PP_bind| HM:PFM:REP 4->82|PF01154|0.00057|31.2|77/174|HMG_CoA_synt_N| GO:PFM:NREP 4 GO:PFM GO:0004315|"GO:3-oxoacyl-[acyl-carrier-protein] synthase activity"|PF08545|IPR013751| GO:PFM GO:0006633|"GO:fatty acid biosynthetic process"|PF08545|IPR013751| GO:PFM GO:0008610|"GO:lipid biosynthetic process"|PF08541|IPR013747| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF08541|IPR013747| RP:SCP:NREP 2 RP:SCP:REP 6->172|1eblA1|3e-56|38.3|167/174|c.95.1.2| RP:SCP:REP 214->325|1u0mA2|2e-19|23.2|112/148|c.95.1.2| HM:SCP:REP 1->175|1u0vA1|3e-49|38.5|174/0|c.95.1.2|1/1|Thiolase-like| HM:SCP:REP 158->324|1ee0A2|7.3e-25|34.0|144/160|c.95.1.2|1/1|Thiolase-like| OP:NHOMO 1321 OP:NHOMOORG 846 OP:PATTERN -------------------------------------------------------------------- 11314---------21111-11--21111112-11152111333212222211222131111112225631--------11-111111422114112--225433124141111111111111112111111121122211---2111111111111111112111111511111111111111121111-112333332243323222132212332111111111111132111111111111111121111-111111-1-2211111222211111111111111111111111111111111111111211111111111132333333323251223111-23--1111111111113111121122212222211111221112112222222222222222-33133112242222211121111111223121111122211111111111111111111111111--11111111211111111-2112121111411214333331131555533213111111221111112112111131212311111111111111232121111121111222422222222235121111122212311111111111111113311211221142333532333343223251-11111------12211111112111111-1111121111111111112111221211111111111111111211111111-1111211112221111222213444113111111111111111111111111111--44442425122221332111111111111122222232232223333322322221113--1111--------1-1-------------------------11----2---131 1-------1----1----------------------------------------------------------------------------------------------31----------------------------------------------------1-------------111A111115115-11-1----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 326 STR:RPRED 100.0 SQ:SECSTR ccccGGGGTcccccccEccTTccGGGcTTcEEEEEEEEcccccTTccccEEEEEEEETTTTccccccEEEEEEEEEEccccccHHccHHHHHcEEcccEEEEEGGGHHHcHHHHHHHHHHHHTHHHHccccccccccEEEEEccTTccGGGccccHHHHHHHHHTcccccccccccGGGTTcEETGGTEEcEEEEEEEEEEETTEEEEEEEEEEEEcEEccccGGGcccTTccHHHHccTTcHHHHccEEEEEEEcccccHHHHHHHHHTHHHHHHTTTccccTTcEEEEEEEEcccccccGGGcccccccccGGEEEEEEEEccc DISOP:02AL 1-2| PSIPRED cccccEEEEEEEEcccccccHHHHHHHHcccHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHHccccHHHccEEEEEccccccccccHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccHHHccccccccccccEEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccEEEEccccHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEEEcc //