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Lactobacillus salivarius UCC118 (lsal0)
Gene : gdhA
DDBJ      :gdhA         NADP-specific glutamate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  555/915 : Eukaryota  173/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.58.1
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->443 1bgvA PDBj e-126 52.6 %
:RPS:PDB   3->444 1bgvA PDBj 4e-99 53.2 %
:RPS:SCOP  15->201 1hwxA2  c.58.1.1 * 3e-60 27.8 %
:RPS:SCOP  233->444 1hwxA1  c.2.1.7 * 9e-52 26.6 %
:HMM:SCOP  1->194 1bgvA2 c.58.1.1 * 4.1e-72 52.1 %
:HMM:SCOP  200->446 1gtmA1 c.2.1.7 * 1.9e-80 49.4 %
:RPS:PFM   56->184 PF02812 * ELFV_dehydrog_N 3e-43 56.6 %
:RPS:PFM   200->440 PF00208 * ELFV_dehydrog 1e-47 47.4 %
:HMM:PFM   200->442 PF00208 * ELFV_dehydrog 7.7e-93 54.4 241/244  
:HMM:PFM   55->184 PF02812 * ELFV_dehydrog_N 6.1e-49 43.8 130/131  
:BLT:SWISS 4->444 DHE4_CORGL e-146 58.2 %
:PROS 120->133|PS00074|GLFV_DEHYDROGENASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00104.1 GT:GENE gdhA GT:PRODUCT NADP-specific glutamate dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1342998..1344332) GB:FROM 1342998 GB:TO 1344332 GB:DIRECTION - GB:GENE gdhA GB:PRODUCT NADP-specific glutamate dehydrogenase GB:NOTE COG0334 [E] Glutamate dehydrogenase/leucine dehydrogenase GB:PROTEIN_ID ABE00104.1 GB:DB_XREF GI:90821465 GB:GENE:GENE gdhA LENGTH 444 SQ:AASEQ MSYVDDVYSRVVEQNPSQPEFHQAVKEVLESLRPVIESDEEKYRKEALLERLTTPDRQILFRVSWVDDNGQVQVNNGYRVQFNNAIGPYKGGLRLHPSVYLGIIKFLGFEQVFKNALTSLPIGGAKGGSDFDPKGKSDREVMAFCQSFMTELYKYVGADVDVPAGDIGTGAREVGYLFGQYKRLKSTYEGVLTGKGLTFGGSLARTEATGYGLLYLVEELLKDHGKDLKDKVVTVSGAGNVAIYAIEKAQQLGAKVVTCSDSNGWVYDPEGIDVELLKDVKEVKRQRLTEYAARRESAQYHEGRGVWSVKADVALPCATQNELNLDDAKNLVANGVLAVCEGANMPTTLDATKYLQENGVLFVPGKASNAGGVAVSALEMSQNSERLSWSFEEVDGKLKDIMVNIYHNIDEAAKKYGLDGDYVAGANIAGFLKVAEAMEAQGVV GT:EXON 1|1-444:0| BL:SWS:NREP 1 BL:SWS:REP 4->444|DHE4_CORGL|e-146|58.2|440/447| PROS 120->133|PS00074|GLFV_DEHYDROGENASE|PDOC00071| SEG 210->231|gygllylveellkdhgkdlkdk| BL:PDB:NREP 1 BL:PDB:REP 3->443|1bgvA|e-126|52.6|439/449| RP:PDB:NREP 1 RP:PDB:REP 3->444|1bgvA|4e-99|53.2|440/449| RP:PFM:NREP 2 RP:PFM:REP 56->184|PF02812|3e-43|56.6|129/130|ELFV_dehydrog_N| RP:PFM:REP 200->440|PF00208|1e-47|47.4|232/234|ELFV_dehydrog| HM:PFM:NREP 2 HM:PFM:REP 200->442|PF00208|7.7e-93|54.4|241/244|ELFV_dehydrog| HM:PFM:REP 55->184|PF02812|6.1e-49|43.8|130/131|ELFV_dehydrog_N| GO:PFM:NREP 6 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF02812|IPR006097| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02812|IPR006097| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02812|IPR006097| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00208|IPR006096| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00208|IPR006096| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00208|IPR006096| RP:SCP:NREP 2 RP:SCP:REP 15->201|1hwxA2|3e-60|27.8|187/208|c.58.1.1| RP:SCP:REP 233->444|1hwxA1|9e-52|26.6|203/293|c.2.1.7| HM:SCP:REP 1->194|1bgvA2|4.1e-72|52.1|190/194|c.58.1.1|1/1|Aminoacid dehydrogenase-like, N-terminal domain| HM:SCP:REP 200->446|1gtmA1|1.9e-80|49.4|237/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1052 OP:NHOMOORG 780 OP:PATTERN 111-1111122222411122221-3333112211--------1--1---1113-11121111221111 122--1121111111------1---1------11111154-111-1121--111112-----11-11-11111111111111----1-2222-2111--1121221-222---------------11-11----1122222---211111111----------11-12111-1-----1----22222--1212111111111111111252222112222211111111122111111111111111111121----1-----11--11-1-------111111111111111111111-------------1111111111-211-11111111111111111111111211--111-11-1--112-1111-1---2-----1--11211-----11111111112-11---1----1-------21---1---1-1111111211---------------------------------------------11131-221221111111111111111111111112222--11111123211-1112--1---112222221111-11-112-1-1-1----1121112122222232211111-----111111111111--1--11-21--111--------1------1-------2111------1-1-1111111111111-111111111111111111122211111221222222222222221111-111-111111111111---1------1-1-1--1111111-111--1112222222111-111111111111111---1111111111-------------------------------1--------------1-1-------------------------1221211111121 22--111-41-111--1221111111111111111-121111111111111111-1111111111-1111111112222211111111-1--111111111-1111-11212222312-1111111-1-3E3-223111121121112-11-13-11222372311152421141222-----4374671482211112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 443 STR:RPRED 99.8 SQ:SECSTR #HHHHHHHHHHHHHTTTcHHHHHHHHHHHHTTHHHHHTcHHHHHHTTHHHHHTcccEEEEEEEEEEcTTccEEEEEEEEEEEEcccccEEEEEEEcTTccHHHHHHHHHHHHHHHHHTcccccEEEEEEccccTTccHHHHHHHHHHHHHHHGGGccTTTEEEEccTTccHHHHHHHHHHHHHHHTcccGGcccccGGGTccTTTTTHHHHHHHHHHHHHHHHTTcccTTcEEEEccccHHHHHHHHHHHHHTcEEEEEEETTEEEEcTTcHHHHHHHHHHHHccccTHHHHHHHHTcEEEETccGGGccccEEEccccTTcccHHHHHHHHHTTccEEEccccccccHHHHHHHHcTTcEEEcHHHHTTHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHccc DISOP:02AL 1-1| PSIPRED cccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccEEEEEEEEEEcccccEEEEEEEEEEEccccccccccEEEcccccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHHHHcccccEEEccccHHHcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEEccEEEEccccccHHHHHHHHHHHccEEEEccccccccEEccccccccccccEEEEccccccccHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEcHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccc //